Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   INT76_RS10565 Genome accession   NZ_CP073084
Coordinates   2104374..2105177 (+) Length   267 a.a.
NCBI ID   WP_212570637.1    Uniprot ID   -
Organism   Streptococcus oriscaviae strain HKU75     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2099374..2110177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INT76_RS10540 (INT76_10540) - 2099812..2100510 (-) 699 WP_212570627.1 amino acid ABC transporter permease -
  INT76_RS10545 (INT76_10545) - 2100523..2101362 (-) 840 WP_212570629.1 transporter substrate-binding domain-containing protein -
  INT76_RS10550 (INT76_10550) - 2101372..2102133 (-) 762 WP_212570631.1 amino acid ABC transporter ATP-binding protein -
  INT76_RS10555 (INT76_10555) micA 2102315..2103025 (+) 711 WP_212570633.1 response regulator YycF Regulator
  INT76_RS10560 (INT76_10560) micB 2103018..2104367 (+) 1350 WP_212570635.1 cell wall metabolism sensor histidine kinase VicK Regulator
  INT76_RS10565 (INT76_10565) vicX 2104374..2105177 (+) 804 WP_212570637.1 MBL fold metallo-hydrolase Regulator
  INT76_RS10570 (INT76_10570) pbp2b 2105304..2107385 (+) 2082 WP_212570639.1 penicillin-binding protein PBP2B -
  INT76_RS10575 (INT76_10575) recR 2107394..2107990 (+) 597 WP_212570650.1 recombination mediator RecR -
  INT76_RS10580 (INT76_10580) - 2108080..2109126 (+) 1047 WP_212570652.1 D-alanine--D-alanine ligase -
  INT76_RS10585 (INT76_10585) - 2109161..2109535 (+) 375 WP_212570654.1 OsmC family protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29651.64 Da        Isoelectric Point: 5.9856

>NTDB_id=557872 INT76_RS10565 WP_212570637.1 2104374..2105177(+) (vicX) [Streptococcus oriscaviae strain HKU75]
MAEKGFYYSILASGSSGNSFYLETDQKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANEPTWRAMEGKLGKIDIAQKHIFELGVTKTLGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
ENADAYLIESNHDINILRAGSYSWSLKQRILSDKGHLCNEDGADAMIRALGNRTKKIYLGHLSKENNIKELAHLTMVNQL
AQADLAVGSDFQVYDTSPDTATKLTRI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=557872 INT76_RS10565 WP_212570637.1 2104374..2105177(+) (vicX) [Streptococcus oriscaviae strain HKU75]
ATGGCAGAGAAGGGATTTTATTATAGCATTTTAGCTTCGGGCTCCAGTGGAAATTCCTTCTATCTGGAAACCGACCAGAA
AAAAATTTTGGTGGACGCAGGTCTGTCTGGGAAAAAAATTACCAGCCTGCTGGCAGAAATTGACCGCAAGCCAGAGGATA
TTGATGCTATCTTGGTAACCCATGAACATAGCGACCATATTCATGGTATAGGAGTGCTGGCTCGTAAATACGGGATGGAC
ATCTATGCTAACGAGCCTACCTGGAGAGCTATGGAAGGGAAGTTAGGAAAGATCGATATAGCACAGAAGCATATTTTTGA
ACTAGGAGTGACAAAGACCCTTGGGGATTTGGATATTGAATCCTTTGGGGTCAGCCATGATGCAGCCTGTCCTCAATTTT
ACCGCTTTATGAAAGATGACAAGAGTTTTGTCATGCTGACGGATACTGGCTATGTCAGTGATCGCATGGTGGGGATTGTT
GAAAATGCGGACGCCTATCTAATCGAGTCAAATCACGACATCAATATTTTACGGGCAGGCTCCTACTCATGGAGTCTCAA
ACAGCGGATACTGTCCGATAAGGGACACCTTTGTAATGAAGACGGGGCAGATGCCATGATTCGAGCTTTGGGCAATCGCA
CCAAGAAAATCTATCTAGGGCATTTGTCCAAAGAAAACAATATCAAGGAACTGGCTCACCTAACCATGGTCAATCAATTG
GCCCAAGCAGATTTGGCTGTCGGCAGTGACTTTCAAGTCTATGACACATCGCCAGACACAGCAACCAAATTGACCAGAAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.779

100

0.768