Detailed information NTG0557512

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: J7D36_RS09880
• Genome accession: NZ_CP073060
• Coordinates: 2109089..2109790 (-)
• Length: 233 a.a.
• NCBI ID: WP_021510829.1
• Uniprot ID: A0AAV3K023
• Organism: Acinetobacter baumannii strain DETAB-P39
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2104089..2114790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7D36_RS09850 (J7D36_09850)	-	2104397..2104840 (-)	444	WP_021510827.1	SRPBCC family protein	-
J7D36_RS09855 (J7D36_09855)	tadA	2104910..2105412 (-)	503	Protein_1928	tRNA adenosine(34) deaminase TadA	-
J7D36_RS09860 (J7D36_09860)	-	2105419..2106543 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
J7D36_RS09865 (J7D36_09865)	ung	2106540..2107253 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
J7D36_RS09870 (J7D36_09870)	-	2107304..2107900 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
J7D36_RS09875 (J7D36_09875)	gspK	2108130..2109089 (-)	960	WP_021510828.1	type II secretion system minor pseudopilin GspK	-
J7D36_RS09880 (J7D36_09880)	xcpW	2109089..2109790 (-)	702	WP_021510829.1	type II secretion system minor pseudopilin GspJ	Machinery gene
J7D36_RS09885 (J7D36_09885)	xcpV	2109790..2110170 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
J7D36_RS09890 (J7D36_09890)	-	2110160..2110714 (-)	555	WP_000841373.1	type II secretion system protein	-
J7D36_RS09895 (J7D36_09895)	-	2110724..2111332 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
J7D36_RS09900 (J7D36_09900)	-	2111370..2112143 (-)	774	WP_000497298.1	TatD family hydrolase	-
J7D36_RS09905 (J7D36_09905)	-	2112161..2112502 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
J7D36_RS09910 (J7D36_09910)	-	2112514..2113494 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
J7D36_RS09915 (J7D36_09915)	kdsB	2113506..2114267 (-)	762	WP_004835301.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26671.67 Da
• Isoelectric Point: 9.5501

>NTDB_id=557512 J7D36_RS09880 WP_021510829.1 2109089..2109790(-) (xcpW) [Acinetobacter baumannii strain DETAB-P39]
MIKNKYIHIRSFSSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLLLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=557512 J7D36_RS09880 WP_021510829.1 2109089..2109790(-) (xcpW) [Acinetobacter baumannii strain DETAB-P39]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATTGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987