Detailed information NTG0555667

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: J9247_RS19495
• Genome accession: NZ_CP072783
• Coordinates: 4189228..4191453 (-)
• Length: 741 a.a.
• NCBI ID: WP_210224771.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain LICME WGH-6
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4184228..4196453

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J9247_RS19460 (J9247_19460)	murB	4184618..4185637 (-)	1020	WP_121357953.1	UDP-N-acetylmuramate dehydrogenase	-
J9247_RS19465 (J9247_19465)	-	4185634..4186098 (-)	465	WP_003091154.1	low molecular weight protein-tyrosine-phosphatase	-
J9247_RS19470 (J9247_19470)	kdsB	4186098..4186862 (-)	765	WP_033968892.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
J9247_RS19475 (J9247_19475)	-	4186862..4187047 (-)	186	WP_003091157.1	Trm112 family protein	-
J9247_RS19480 (J9247_19480)	lpxK	4187085..4188083 (-)	999	WP_058017665.1	tetraacyldisaccharide 4'-kinase	-
J9247_RS19485 (J9247_19485)	-	4188083..4188523 (-)	441	WP_003091161.1	biopolymer transporter ExbD	-
J9247_RS19490 (J9247_19490)	exbB	4188520..4189155 (-)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
J9247_RS19495 (J9247_19495)	comA	4189228..4191453 (-)	2226	WP_210224771.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
J9247_RS19500 (J9247_19500)	-	4191584..4192117 (+)	534	WP_033936888.1	DUF2062 domain-containing protein	-
J9247_RS19505 (J9247_19505)	-	4192205..4193449 (-)	1245	WP_057389226.1	lipoprotein-releasing ABC transporter permease subunit	-
J9247_RS19510 (J9247_19510)	lolD	4193519..4194202 (-)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
J9247_RS19515 (J9247_19515)	-	4194195..4195445 (-)	1251	WP_003091170.1	lipoprotein-releasing ABC transporter permease subunit	-
J9247_RS19520 (J9247_19520)	-	4195548..4196147 (+)	600	WP_033975956.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80019.70 Da
• Isoelectric Point: 10.5155

>NTDB_id=555667 J9247_RS19495 WP_210224771.1 4189228..4191453(-) (comA) [Pseudomonas aeruginosa strain LICME WGH-6]
MRLGLPALAAGLLALRFLVELPSLGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGITRFRLEEVSGARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLAQRVGAV
GTVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLGTLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PTLAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLL
PALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTREHALLYDSGARQGALDMGERVVVPVLRSLDLRRLDGLLLSHADSDHA
GGAPTVASRFPPGWLVSGEPARLPSPLFADSCDERRWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGEVLLLTGDISRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGGVRRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=555667 J9247_RS19495 WP_210224771.1 4189228..4191453(-) (comA) [Pseudomonas aeruginosa strain LICME WGH-6]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGTGGAATTGCCGTCGCTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGGTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCATCACGCGCTTCCGGCTGGAGGAGGTCAGTGGCGCGCGGGGCGTGCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGTGGTGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCTCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAAGCCTGGTTGTTGGCGCAGCGGGTCGGTGCCGTT
GGAACGGTGAAGGCGGGCCAGCGCCTGCAGCCGGCCAGTGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTCCT
GGCGGTCGACGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCTGGATTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGCTTCGAGGTCCCGGTGCGGCGCGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGCCACCTGGGCTTGCTGACCCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGTGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAACCTGCTGGCGGTACCTTGGATCGAACTGCTGGTAGTGCCC
CCGACCCTGGCGGGGAGCCTGCTGCTGTGGGTACCCGGGCTGGGCGAGGGGCTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGGCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGCGTTGCTACTG
CCGGCGTTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGCCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGAGCATGCCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCATTAGACATGGGCGAGCGGG
TGGTGGTGCCGGTGCTGCGCAGCCTGGACTTGCGACGCCTGGACGGCCTGTTGCTGAGCCATGCCGACAGCGACCATGCA
GGCGGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GTTCGCGGACAGCTGCGACGAGCGGCGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCGGCG
ACAGCAACGACCGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATCTCGCGTGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCGCCGCACCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCGGTGTACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.946	97.301	0.574
comA	Ralstonia pseudosolanacearum GMI1000	36.327	99.19	0.36