Detailed information NTG0554617

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LZ754_RS09930
• Genome accession: NZ_CP090511
• Coordinates: 2117661..2118806 (+)
• Length: 381 a.a.
• NCBI ID: WP_004086451.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain Oak 35874
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2112661..2123806

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ754_RS09910 (LZ754_09910)	rsmB	2113450..2114739 (-)	1290	WP_004086443.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
LZ754_RS09915 (LZ754_09915)	fmt	2114736..2115659 (-)	924	WP_004086445.1	methionyl-tRNA formyltransferase	-
LZ754_RS09920 (LZ754_09920)	def	2115765..2116277 (-)	513	WP_004086447.1	peptide deformylase	-
LZ754_RS09925 (LZ754_09925)	-	2116416..2117570 (+)	1155	WP_038211547.1	LysM peptidoglycan-binding domain-containing protein	-
LZ754_RS09930 (LZ754_09930)	dprA	2117661..2118806 (+)	1146	WP_004086451.1	DNA-processing protein DprA	Machinery gene
LZ754_RS09935 (LZ754_09935)	-	2118852..2119325 (+)	474	WP_004089636.1	DUF494 family protein	-
LZ754_RS09940 (LZ754_09940)	-	2120297..2122744 (+)	2448	WP_004086454.1	DNA topoisomerase I	-
LZ754_RS09945 (LZ754_09945)	-	2122858..2123421 (+)	564	WP_021358455.1	Sua5/YciO/YrdC/YwlC family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40325.16 Da
• Isoelectric Point: 8.7008

>NTDB_id=554617 LZ754_RS09930 WP_004086451.1 2117661..2118806(+) (dprA) [Xylella fastidiosa subsp. multiplex strain Oak 35874]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTDGAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGAR
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPLLS
TPNSKDPKYHTLWQALAHDPMSMDSLIGRTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=554617 LZ754_RS09930 WP_004086451.1 2117661..2118806(+) (dprA) [Xylella fastidiosa subsp. multiplex strain Oak 35874]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACGCCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGCGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGGAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCCGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGCATCATCAGCGGAATGGCAGCCGGAATCGACGCT
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCAGATGTGCCATACCC
AGCACGTCACAAAAAACTGCACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCTGCCCACTTTCCACAACGCAACAGGATTATTGCAGGCTTGGCGCTGGGCACACTGGTGGTCGAAGCTGGAGCGCGT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGACGTGCTGTATTCGCAGTGCCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACACTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACGCTAGCAGCGCCGTTAGCACACACCTTGCGTGAGCGCCTTGATGCTCCCAGTTGGCCTGTAGCGCCATTATTAAGC
ACACCAAACAGTAAAGACCCTAAATACCACACACTTTGGCAGGCCCTTGCACATGACCCAATGTCCATGGACTCATTGAT
TGGCCGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACCTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (321-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	41.176	89.239	0.367
dprA	Vibrio cholerae strain A1552	41.176	89.239	0.367
dprA	Acinetobacter baumannii D1279779	37.602	96.325	0.362