Detailed information NTG0554570

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: J7655_RS13915
• Genome accession: NZ_CP072610
• Coordinates: 3020095..3022308 (-)
• Length: 737 a.a.
• NCBI ID: WP_230927728.1
• Uniprot ID: -
• Organism: Pseudomonas wenzhouensis strain A20
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3015095..3027308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7655_RS13880 (J7655_13835)	murB	3015526..3016545 (-)	1020	WP_230924947.1	UDP-N-acetylmuramate dehydrogenase	-
J7655_RS13885 (J7655_13840)	-	3016542..3017006 (-)	465	WP_230924948.1	low molecular weight protein-tyrosine-phosphatase	-
J7655_RS13890 (J7655_13845)	kdsB	3017006..3017770 (-)	765	WP_230924949.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
J7655_RS13895 (J7655_13850)	-	3017771..3017956 (-)	186	WP_003245207.1	Trm112 family protein	-
J7655_RS13900 (J7655_13855)	lpxK	3017979..3018980 (-)	1002	WP_230924950.1	tetraacyldisaccharide 4'-kinase	-
J7655_RS13905 (J7655_13860)	-	3018981..3019409 (-)	429	WP_230924951.1	ExbD/TolR family protein	-
J7655_RS13910 (J7655_13865)	exbB	3019406..3020038 (-)	633	WP_037000321.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
J7655_RS13915 (J7655_13870)	comA	3020095..3022308 (-)	2214	WP_230927728.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
J7655_RS13920 (J7655_13875)	-	3022447..3022971 (+)	525	WP_230924952.1	DUF2062 domain-containing protein	-
J7655_RS13925 (J7655_13880)	-	3023129..3024373 (-)	1245	WP_230924953.1	lipoprotein-releasing ABC transporter permease subunit	-
J7655_RS13930 (J7655_13885)	lolD	3024373..3025059 (-)	687	WP_187272882.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
J7655_RS13935 (J7655_13890)	-	3025079..3026326 (-)	1248	WP_230924954.1	lipoprotein-releasing ABC transporter permease subunit	-
J7655_RS13940 (J7655_13895)	-	3026617..3027183 (+)	567	WP_230924955.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 79878.93 Da
• Isoelectric Point: 9.8791

>NTDB_id=554570 J7655_RS13915 WP_230927728.1 3020095..3022308(-) (comA) [Pseudomonas wenzhouensis strain A20]
MLALALGLLTLRFLPALPPGWLLAIAACAGLALLLSRLYPLGFFLLGLAWACSSAQSALDDRLAAQLDGRTLWLEGRVVG
LPEVSEGVVRFLLEEAHSRRAELPQRLRVAWYGGPTVQGGERWRLAVNLKRPHGLVNPQRFDYEAWLLAQRIGATGTIKS
GERLSSATGLGSWRDSLRQQLLAVPAFERQGAIAALVLGDGSGLSTTDWRLLQHTGTVHLMVISGQHIALLAGFLYGLVA
LLAKLGAWPRRLPWLPCACALALSGALLYGFLAGFEVPVRRACVMVALVLLWRMRFRHLGAWWPLLLALIVVLLLEPLAS
LQPGFWLSFSAVAILVLVFAGRLGLWGWWRGLTRAQWTMAIGLLPMMLILGLPVSSSGPLANLIAVPWVGLVVVPLALLG
TLLLPVPLLGEGVLWLAGGALHLLFELLGVIAAWLPAWLPSNLPLWAWLLAAAGALLLLLPAGVPLRWPGIALLLPALFL
PAPQLDDGRADIWVLDVGQGLAVLVRTREHALLYDAGPRFGDFDTGERIVLPSLRALNVRRLDLLLLSHADNDHAGGAAA
IKARMPVSRVVSGEPQRLADALGAEACASGQSWQWNEVTFRLWQWQQASSGNQLSCVLQIEAAGERLLLTGDIDAQAEQA
LMQADLPLASQWLLAPHHGSRTSSSQAFIDAVAAQHVLITRSRHNAFGHPHPQVLARYRAAGVEVHDTALHGALHIRLGL
HGTARGLRSEPRFWREK

Nucleotide

• Length: 2214 bp

>NTDB_id=554570 J7655_RS13915 WP_230927728.1 3020095..3022308(-) (comA) [Pseudomonas wenzhouensis strain A20]
ATGTTGGCGCTGGCCCTGGGCTTGCTCACGCTGCGTTTTTTGCCGGCTTTGCCGCCAGGCTGGCTGTTAGCGATTGCAGC
CTGTGCCGGCCTGGCACTGTTGCTATCGCGCCTTTATCCGCTGGGCTTCTTTCTGCTCGGGCTGGCCTGGGCGTGCAGTT
CGGCGCAATCGGCGCTGGATGATCGCCTCGCTGCGCAACTCGATGGTCGTACCCTATGGCTGGAGGGACGGGTGGTGGGC
TTACCCGAAGTCTCCGAGGGTGTCGTGCGCTTTTTGCTGGAGGAGGCCCACTCGCGACGTGCCGAGTTGCCGCAAAGGCT
GCGCGTGGCCTGGTATGGCGGGCCGACGGTGCAAGGCGGCGAGCGCTGGCGGCTGGCGGTCAATCTCAAGCGCCCGCATG
GTCTGGTCAATCCGCAGCGTTTCGACTACGAGGCCTGGCTGTTGGCGCAGCGTATCGGCGCTACGGGTACGATCAAGTCA
GGTGAGCGCCTGTCATCCGCGACAGGATTGGGCAGTTGGCGTGACAGCCTGCGTCAGCAATTGCTGGCTGTGCCGGCCTT
TGAGCGGCAGGGCGCCATTGCGGCGCTGGTTCTGGGTGATGGTTCGGGTCTGAGCACGACAGACTGGCGCCTGCTGCAGC
ACACCGGAACGGTGCATCTGATGGTCATCTCGGGGCAGCACATTGCGCTGCTGGCCGGGTTTCTCTATGGCCTGGTGGCA
CTGCTGGCGAAGCTCGGTGCCTGGCCCAGGCGCCTGCCCTGGCTGCCCTGTGCTTGTGCCTTAGCCCTGAGTGGAGCCTT
GCTCTACGGTTTTCTGGCCGGTTTCGAGGTGCCGGTGCGCCGAGCCTGTGTGATGGTCGCGCTGGTGCTGCTATGGCGTA
TGCGTTTTCGCCATCTGGGCGCCTGGTGGCCGCTGCTGCTGGCCTTGATCGTGGTTCTGCTGCTGGAACCACTGGCATCC
TTGCAGCCGGGGTTCTGGCTGTCGTTTTCGGCAGTGGCGATTCTGGTGCTGGTATTCGCTGGTCGTCTCGGTCTCTGGGG
GTGGTGGCGTGGCCTGACGCGCGCGCAGTGGACCATGGCCATCGGCCTGTTGCCGATGATGTTGATCCTCGGTCTGCCGG
TGAGCAGTAGCGGGCCACTGGCCAATCTGATTGCCGTGCCCTGGGTTGGCTTGGTGGTCGTGCCTCTGGCGTTGTTGGGC
ACTTTGCTACTGCCTGTCCCGCTGCTGGGTGAAGGCGTGCTGTGGCTGGCCGGTGGTGCATTGCACCTGTTGTTCGAACT
GCTCGGCGTCATCGCTGCCTGGCTACCGGCCTGGCTGCCCAGCAACCTGCCGCTGTGGGCCTGGCTATTGGCTGCGGCTG
GCGCGTTGCTGCTTCTGCTGCCGGCTGGTGTGCCCTTGCGCTGGCCCGGCATCGCGCTGCTATTGCCGGCATTGTTTCTG
CCGGCGCCACAGTTGGACGACGGGCGTGCCGACATCTGGGTGCTGGATGTCGGGCAGGGGCTGGCCGTGCTGGTGCGCAC
CCGGGAGCATGCTCTGCTTTACGATGCCGGGCCGCGTTTCGGCGATTTCGATACCGGTGAGCGTATCGTCCTGCCTTCGT
TGCGCGCGCTGAATGTGCGACGTCTCGATCTGCTGCTGCTCAGCCATGCCGATAACGATCATGCCGGTGGTGCGGCCGCG
ATCAAGGCCAGGATGCCGGTATCGAGGGTTGTCAGCGGTGAACCGCAAAGGCTGGCCGATGCCCTCGGCGCCGAAGCGTG
CGCGTCAGGGCAGAGCTGGCAATGGAACGAGGTGACCTTCAGGTTATGGCAATGGCAGCAGGCCAGCTCCGGCAACCAGT
TGTCCTGTGTACTGCAGATAGAGGCGGCGGGCGAACGCCTGCTGTTGACCGGCGATATCGATGCACAGGCCGAGCAGGCG
TTGATGCAGGCCGACTTGCCTCTGGCCTCGCAGTGGCTACTGGCTCCCCACCACGGTAGCCGCACGTCATCCAGCCAGGC
GTTCATCGATGCCGTCGCAGCGCAGCATGTGCTGATCACCCGCAGTCGCCACAACGCCTTCGGCCATCCTCACCCACAGG
TGCTTGCACGCTATCGCGCTGCGGGCGTCGAGGTGCATGACACGGCGTTGCACGGCGCCCTGCATATTCGCCTGGGGCTA
CATGGCACGGCGCGAGGGTTGCGAAGCGAGCCACGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (19-163)

• Competence protein (Competence) (196-461)

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-672)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.967	97.422	0.662
comA	Ralstonia pseudosolanacearum GMI1000	35.68	100	0.406