Detailed information NTG0554557

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LZ759_RS09210
• Genome accession: NZ_CP090510
• Coordinates: 2050108..2051253 (+)
• Length: 381 a.a.
• NCBI ID: WP_004086451.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain LA-Y3C
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2045108..2056253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ759_RS09190 (LZ759_09190)	rsmB	2045891..2047186 (-)	1296	WP_140161051.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
LZ759_RS09195 (LZ759_09195)	fmt	2047183..2048106 (-)	924	WP_038229920.1	methionyl-tRNA formyltransferase	-
LZ759_RS09200 (LZ759_09200)	def	2048212..2048724 (-)	513	WP_004089639.1	peptide deformylase	-
LZ759_RS09205 (LZ759_09205)	-	2048863..2050017 (+)	1155	WP_058564761.1	LysM peptidoglycan-binding domain-containing protein	-
LZ759_RS09210 (LZ759_09210)	dprA	2050108..2051253 (+)	1146	WP_004086451.1	DNA-processing protein DprA	Machinery gene
LZ759_RS09215 (LZ759_09215)	-	2051299..2051772 (+)	474	WP_004089636.1	DUF494 family protein	-
LZ759_RS09220 (LZ759_09220)	-	2052744..2055191 (+)	2448	WP_004086454.1	DNA topoisomerase I	-
LZ759_RS09225 (LZ759_09225)	-	2055305..2055868 (+)	564	WP_021358455.1	Sua5/YciO/YrdC/YwlC family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40325.16 Da
• Isoelectric Point: 8.7008

>NTDB_id=554557 LZ759_RS09210 WP_004086451.1 2050108..2051253(+) (dprA) [Xylella fastidiosa subsp. multiplex strain LA-Y3C]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTDGAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGAR
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPLLS
TPNSKDPKYHTLWQALAHDPMSMDSLIGRTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=554557 LZ759_RS09210 WP_004086451.1 2050108..2051253(+) (dprA) [Xylella fastidiosa subsp. multiplex strain LA-Y3C]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACGCCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGCGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGGAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCCGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGCATCATCAGCGGAATGGCAGCCGGAATCGACGCT
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCAGATGTGCCATACCC
AGCACGTCACAAAAAACTGCACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCTGCCCACTTTCCACAACGCAACAGGATTATTGCAGGCTTGGCGCTGGGCACACTGGTGGTCGAAGCTGGAGCGCGT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGGCGTGCTGTATTCGCAGTGCCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACACTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACGCTAGCAGCGCCGTTAGCACACACCTTGCGTGAGCGCCTTGATGCTCCCAGTTGGCCTGTAGCGCCATTATTAAGC
ACACCAAACAGTAAAGACCCTAAATACCACACACTTTGGCAGGCCCTTGCACATGACCCAATGTCCATGGACTCATTGAT
TGGCCGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACCTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (321-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	41.176	89.239	0.367
dprA	Vibrio cholerae strain A1552	41.176	89.239	0.367
dprA	Acinetobacter baumannii D1279779	37.602	96.325	0.362