Detailed information NTG0554400

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LZ757_RS01655
• Genome accession: NZ_CP090506
• Coordinates: 405141..406286 (-)
• Length: 381 a.a.
• NCBI ID: WP_038229914.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. morus strain Riv19
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 400141..411286

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ757_RS01640 (LZ757_01640)	-	400524..401087 (-)	564	WP_021358455.1	Sua5/YciO/YrdC/YwlC family protein	-
LZ757_RS01645 (LZ757_01645)	-	401201..403648 (-)	2448	WP_038229912.1	DNA topoisomerase I	-
LZ757_RS01650 (LZ757_01650)	-	404622..405095 (-)	474	WP_004089636.1	DUF494 family protein	-
LZ757_RS01655 (LZ757_01655)	dprA	405141..406286 (-)	1146	WP_038229914.1	DNA-processing protein DprA	Machinery gene
LZ757_RS01660 (LZ757_01660)	-	406377..407531 (-)	1155	WP_038229916.1	LysM peptidoglycan-binding domain-containing protein	-
LZ757_RS01665 (LZ757_01665)	def	407670..408182 (+)	513	WP_038229918.1	peptide deformylase	-
LZ757_RS01670 (LZ757_01670)	fmt	408288..409211 (+)	924	WP_038229920.1	methionyl-tRNA formyltransferase	-
LZ757_RS01675 (LZ757_01675)	rsmB	409208..410503 (+)	1296	WP_140161051.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40383.20 Da
• Isoelectric Point: 8.3549

>NTDB_id=554400 LZ757_RS01655 WP_038229914.1 405141..406286(-) (dprA) [Xylella fastidiosa subsp. morus strain Riv19]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTDGAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGAR
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPLLS
TPNSKDPKYHTLWQALAHDPMSMDSLIDRTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=554400 LZ757_RS01655 WP_038229914.1 405141..406286(-) (dprA) [Xylella fastidiosa subsp. morus strain Riv19]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACGCCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGCGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGGAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCCGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGCATCATCAGCGGAATGGCAGCCGGAATCGACGCT
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCAGATGTGCCATACCC
AGCACGTCACAAAAAACTGCACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCTGCCCACTTTCCACAACGCAACAGGATTATTGCAGGCTTGGCGCTGGGCACACTGGTGGTCGAAGCTGGAGCTCGT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGGCGTGCTGTATTCGCAGTACCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACACTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACGCTAGCAGCGCCGTTAGCACACACCTTGCGTGAGCGCCTTGATGCTCCTAGTTGGCCTGTAGCGCCATTATTAAGC
ACACCAAACAGTAAAGACCCTAAATACCACACACTTTGGCAGGCCCTTGCACATGACCCAATGTCCATGGACTCATTAAT
TGACCGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACCTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (321-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	41.176	89.239	0.367
dprA	Vibrio cholerae strain A1552	41.176	89.239	0.367
dprA	Acinetobacter baumannii D1279779	37.602	96.325	0.362