Detailed information NTG0554342

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LZ755_RS01660
• Genome accession: NZ_CP090504
• Coordinates: 405174..406319 (-)
• Length: 381 a.a.
• NCBI ID: WP_038229914.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. morus strain Riv25
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 400174..411319

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ755_RS01645 (LZ755_01645)	-	400557..401120 (-)	564	WP_021358455.1	Sua5/YciO/YrdC/YwlC family protein	-
LZ755_RS01650 (LZ755_01650)	-	401234..403681 (-)	2448	WP_038229912.1	DNA topoisomerase I	-
LZ755_RS01655 (LZ755_01655)	-	404655..405128 (-)	474	WP_004089636.1	DUF494 family protein	-
LZ755_RS01660 (LZ755_01660)	dprA	405174..406319 (-)	1146	WP_038229914.1	DNA-processing protein DprA	Machinery gene
LZ755_RS01665 (LZ755_01665)	-	406410..407564 (-)	1155	WP_038229916.1	LysM peptidoglycan-binding domain-containing protein	-
LZ755_RS01670 (LZ755_01670)	def	407703..408215 (+)	513	WP_038229918.1	peptide deformylase	-
LZ755_RS01675 (LZ755_01675)	fmt	408321..409244 (+)	924	WP_038229920.1	methionyl-tRNA formyltransferase	-
LZ755_RS01680 (LZ755_01680)	rsmB	409241..410536 (+)	1296	WP_140161051.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40383.20 Da
• Isoelectric Point: 8.3549

>NTDB_id=554342 LZ755_RS01660 WP_038229914.1 405174..406319(-) (dprA) [Xylella fastidiosa subsp. morus strain Riv25]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTDGAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGAR
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPLLS
TPNSKDPKYHTLWQALAHDPMSMDSLIDRTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=554342 LZ755_RS01660 WP_038229914.1 405174..406319(-) (dprA) [Xylella fastidiosa subsp. morus strain Riv25]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACGCCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGCGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGGAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCCGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGCATCATCAGCGGAATGGCAGCCGGAATCGACGCT
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCAGATGTGCCATACCC
AGCACGTCACAAAAAACTGCACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCTGCCCACTTTCCACAACGCAACAGGATTATTGCAGGCTTGGCGCTGGGCACACTGGTGGTCGAAGCTGGAGCTCGT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGGCGTGCTGTATTCGCAGTACCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACACTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACGCTAGCAGCGCCGTTAGCACACACCTTGCGTGAGCGCCTTGATGCTCCTAGTTGGCCTGTAGCGCCATTATTAAGC
ACACCAAACAGTAAAGACCCTAAATACCACACACTTTGGCAGGCCCTTGCACATGACCCAATGTCCATGGACTCATTAAT
TGACCGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACCTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (321-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	41.176	89.239	0.367
dprA	Vibrio cholerae strain A1552	41.176	89.239	0.367
dprA	Acinetobacter baumannii D1279779	37.602	96.325	0.362