Detailed information NTG0554262

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: J6600_RS16695
• Genome accession: NZ_CP072563
• Coordinates: 3423944..3425107 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus sp. LJBV19
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3418944..3430107

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6600_RS16665 (J6600_16665)	-	3419209..3419628 (-)	420	WP_209387641.1	TIGR03826 family flagellar region protein	-
J6600_RS16670 (J6600_16670)	comFC	3419702..3420391 (-)	690	WP_209388365.1	phosphoribosyltransferase family protein	Machinery gene
J6600_RS16675 (J6600_16675)	-	3420397..3420681 (-)	285	WP_209387642.1	late competence development ComFB family protein	-
J6600_RS16680 (J6600_16680)	comFA	3420739..3422124 (-)	1386	WP_209387643.1	DEAD/DEAH box helicase	Machinery gene
J6600_RS16685 (J6600_16685)	-	3422232..3423080 (-)	849	WP_003151387.1	DegV family protein	-
J6600_RS16690 (J6600_16690)	degU	3423178..3423867 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
J6600_RS16695 (J6600_16695)	degS	3423944..3425107 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
J6600_RS16700 (J6600_16700)	-	3425330..3425977 (+)	648	WP_007614107.1	YigZ family protein	-
J6600_RS16705 (J6600_16705)	-	3425982..3427136 (+)	1155	WP_209387644.1	LCP family protein	-
J6600_RS16710 (J6600_16710)	-	3427235..3428311 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
J6600_RS16715 (J6600_16715)	-	3428444..3429640 (-)	1197	WP_209387645.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=554262 J6600_RS16695 WP_007407484.1 3423944..3425107(-) (degS) [Bacillus sp. LJBV19]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=554262 J6600_RS16695 WP_007407484.1 3423944..3425107(-) (degS) [Bacillus sp. LJBV19]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGTCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGATAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951