Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   J7649_RS13870 Genome accession   NZ_CP072549
Coordinates   2961500..2965951 (+) Length   1483 a.a.
NCBI ID   WP_219308684.1    Uniprot ID   -
Organism   Acinetobacter lwoffii strain H7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2956500..2970951
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7649_RS13845 (J7649_13845) - 2956961..2957608 (-) 648 WP_219310132.1 hypothetical protein -
  J7649_RS13850 (J7649_13850) pilG 2957895..2958278 (+) 384 WP_004280711.1 twitching motility response regulator PilG Regulator
  J7649_RS13855 (J7649_13855) - 2958303..2958671 (+) 369 WP_004280710.1 response regulator -
  J7649_RS13860 (J7649_13860) - 2958677..2959213 (+) 537 WP_004280709.1 chemotaxis protein CheW -
  J7649_RS13865 (J7649_13865) - 2959260..2961332 (+) 2073 WP_005106253.1 methyl-accepting chemotaxis protein -
  J7649_RS13870 (J7649_13870) chpA 2961500..2965951 (+) 4452 WP_219308684.1 Hpt domain-containing protein Regulator
  J7649_RS13875 (J7649_13875) - 2965955..2966413 (+) 459 WP_219308686.1 hypothetical protein -
  J7649_RS13880 (J7649_13880) dapE 2966479..2967615 (-) 1137 WP_114540997.1 succinyl-diaminopimelate desuccinylase -
  J7649_RS13885 (J7649_13885) - 2967737..2967889 (-) 153 WP_004280704.1 entericidin A/B family lipoprotein -
  J7649_RS13890 (J7649_13890) - 2968002..2968877 (-) 876 WP_219308688.1 DUF1853 family protein -
  J7649_RS13895 (J7649_13895) - 2968965..2969318 (+) 354 Protein_2689 YbaN family protein -
  J7649_RS13900 (J7649_13900) elsL 2969444..2969977 (+) 534 WP_004731981.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1483 a.a.        Molecular weight: 165562.49 Da        Isoelectric Point: 4.3177

>NTDB_id=554145 J7649_RS13870 WP_219308684.1 2961500..2965951(+) (chpA) [Acinetobacter lwoffii strain H7]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELNALFPEWLSNPDHQENLKTIRRHFHTLKGSGRMVGAKSA
GEMAWAVEDTLNRVLSGSIQLTPTVQKFAQAVLNVYQYALYPKFKHVQQLDLDLRPMVLLGQQLQQQISPEPALEELLAL
AVHLTAEGQMTGLELADNEPSEAELTVAPVEVPVRSDIEETVAIFIEEAEEHLDTIATFLRTEDEKSQDYNALIRAIHTL
RGSSSMAQIDQIFEASSKVEHLFKTLLQDEIVSTSKETALLIQYAEFVSDYLHLLRQGNTAKLDAVYATFERVWNDYGFA
VTETNSIQTQGLVSKLVELDIDLLLDAEFEFDKRAQVDYPEYIQALSQQAAELLAHTESRAAQGIHEFTADLKLAYDALL
EKPVLLNSDYAYELFAQAHQEFIHLFDTLAAGQRVILNDEIQKILSELSAFVQQDLEIFAEDTSSQNIELSSETAQAAET
VAPGSVDFAGLSQRIAADRQQQQSTETNRDFDEELLSIFLEEADELLAGIDEDLNTWSKKQDDTTSLNNLMRHLHTLKGG
ANMIAASHIGLIAHELESIYERVIRQQIAVTPALIQIIRLVQDNISDRIQSIREDGIDYPAPEAIAILQNIQALVSGQAV
AAAESANAGVEVAEVEATSIPEPQLEESATTEQPATDLAEAEELLEILESPEATEDTPVERSEEDQLKSIVEESFLEESE
EILANAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMIDVEEVASIAYELETTFEQFAVYQFNSNAYDGLLQKTLVWL
RQAIFQRDYSGFEPLHSSLKKIAYVDVTAQLPERLAKTDNLVVSTDFGFVEGDGTEPPQMMGEWANSGTSDSNNEMIRIS
ADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYS
SLNQLSKSLAESASDLVDFKSTLADKIRETEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQRIVRQTSTTLNRPAEL
IVQNTEGELDRNILERLVTPFEHMLRNAIDHGLEDTTDRIALNKPEVGSIVLNISRQGTDVIVSFSDDGKGINAEKIREK
ALSLDLIKADQVIDQEEILQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKSLGGHVSVSSELGKGTVFTIRVPTTVAVS
DALMVKVGDQQYAISLAQIDRIVRIAPTTLESYFNSKDDYFKIDGANYKLRYLSEFVGNQPIPRLNNVGHSLPVLLIKGN
SGQTIALLVDQLVGSRAQIVVKPIGQQFANVGVVAGATILGDGQVCLILDGQNVARQIQATQRVKQLNDQRDGSRNSNAR
RLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNLVRHHDIHRDLPIIMI
TSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLIAEKQG

Nucleotide


Download         Length: 4452 bp        

>NTDB_id=554145 J7649_RS13870 WP_219308684.1 2961500..2965951(+) (chpA) [Acinetobacter lwoffii strain H7]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACAACGCTTCCTGAAGATAGTTATCTTGACCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAGGAAATCGAAGAGATCTTCGTTGAGTTAAATGCTTTATTTCCAGAATGGTTGAGCAATCCAGATC
ATCAAGAAAATCTGAAGACCATTCGCCGCCATTTTCACACCCTGAAAGGTTCAGGCCGCATGGTCGGGGCAAAATCGGCA
GGGGAAATGGCCTGGGCGGTTGAAGATACCTTAAACCGGGTTTTGTCCGGTTCGATTCAGCTAACACCGACGGTACAGAA
ATTTGCCCAAGCGGTACTGAATGTCTATCAATATGCTTTATATCCAAAATTCAAACATGTACAGCAATTGGATCTCGACC
TGCGTCCAATGGTGCTCTTGGGACAACAATTACAACAACAAATTTCGCCTGAGCCTGCATTGGAAGAATTACTGGCATTG
GCAGTTCATTTGACTGCTGAAGGTCAGATGACAGGTCTTGAGCTTGCAGACAATGAGCCAAGTGAAGCTGAGCTAACAGT
AGCGCCAGTAGAAGTACCGGTTCGCAGTGATATCGAAGAAACTGTGGCGATCTTTATTGAAGAAGCAGAAGAGCATCTGG
ATACGATTGCCACCTTCCTTCGCACTGAAGATGAAAAATCACAAGATTATAATGCGCTGATTCGTGCGATTCATACTTTG
CGCGGCAGTTCATCCATGGCGCAGATTGACCAGATTTTTGAGGCCAGCTCTAAAGTGGAGCATCTGTTCAAAACCCTGCT
GCAAGATGAAATTGTCTCAACCTCAAAAGAAACTGCTTTACTGATTCAGTATGCCGAGTTTGTCAGTGACTATCTGCATT
TGCTACGTCAGGGCAATACTGCAAAACTGGATGCGGTATATGCCACCTTTGAGCGTGTCTGGAATGATTATGGCTTTGCA
GTTACTGAAACCAATAGTATTCAGACGCAAGGCTTGGTGTCCAAACTGGTTGAGCTGGATATTGATCTGTTATTGGATGC
CGAGTTTGAATTTGATAAACGCGCCCAAGTCGATTATCCGGAATATATTCAGGCACTCAGCCAGCAGGCTGCAGAATTGC
TGGCACATACAGAAAGCCGGGCAGCGCAAGGCATTCATGAATTCACTGCCGACCTGAAATTGGCTTATGATGCGCTGCTT
GAAAAGCCAGTGCTGCTAAACAGCGATTATGCTTATGAACTGTTCGCACAGGCGCATCAGGAATTTATTCATTTATTTGA
TACCTTGGCCGCAGGACAGCGCGTCATTCTGAATGATGAGATTCAAAAAATACTCAGCGAACTGTCTGCATTTGTGCAGC
AGGATCTCGAGATATTTGCTGAAGATACTAGCAGTCAGAATATTGAGCTAAGCTCAGAGACTGCGCAGGCGGCTGAAACT
GTCGCGCCTGGCAGTGTCGATTTTGCTGGTTTGAGTCAACGCATCGCTGCAGATCGTCAGCAGCAGCAAAGTACTGAAAC
CAACCGTGATTTTGATGAAGAATTATTAAGTATCTTCCTGGAAGAAGCGGATGAATTGCTCGCAGGCATTGATGAAGATC
TGAATACCTGGAGCAAAAAACAGGATGATACGACTTCACTGAACAATCTGATGCGTCATTTGCATACCTTAAAAGGTGGT
GCAAACATGATTGCAGCTTCGCATATCGGTTTGATTGCGCATGAACTGGAAAGTATTTATGAGCGGGTGATCCGTCAGCA
AATTGCCGTGACACCTGCTTTAATCCAAATTATTCGCCTAGTACAGGACAACATTTCCGATCGTATTCAATCGATTCGGG
AAGACGGTATTGATTATCCTGCACCAGAAGCGATTGCGATTCTGCAAAATATTCAGGCGCTGGTGTCTGGACAAGCTGTT
GCTGCTGCGGAGAGCGCGAACGCTGGAGTTGAAGTTGCAGAGGTCGAAGCGACATCAATTCCTGAACCGCAACTTGAAGA
GTCAGCAACGACTGAACAGCCTGCAACTGATCTGGCTGAAGCTGAAGAATTACTGGAAATCTTGGAATCTCCTGAGGCTA
CTGAAGACACACCAGTAGAACGTTCTGAAGAAGACCAACTGAAATCCATTGTTGAAGAATCTTTCCTGGAAGAATCCGAA
GAGATTCTGGCCAATGCCGAGAAGCTCCTCAATCAATGGTTTGATCAGCGTAGTGACCGTAGTTTATTGCTGCAATTACA
GCGTGCTGCCCACAGTATCAAGGGCGGCGCACGTATGATTGATGTTGAAGAAGTGGCCAGTATTGCCTATGAGCTAGAAA
CGACTTTTGAACAGTTTGCGGTCTATCAATTTAACTCGAATGCCTATGATGGCTTATTGCAGAAAACGCTGGTCTGGTTA
AGACAGGCGATTTTCCAGCGCGACTATAGCGGTTTTGAGCCGCTTCACAGCAGTCTGAAAAAGATTGCTTATGTGGATGT
TACTGCGCAATTGCCTGAGCGTCTGGCGAAAACAGATAATCTTGTAGTCAGCACCGACTTCGGCTTTGTTGAAGGTGATG
GTACTGAACCGCCACAGATGATGGGTGAATGGGCGAATAGCGGTACCAGCGATAGTAATAACGAAATGATCCGTATCTCT
GCTGATCTGGTCGAGAAGATGATTGACCTGTCCGGTGAGAACTCGATTAACCGTTCGCGTATCGAGATGGACCTGGGTCA
GTTGGGCAATACCTTGAACGAGATGGAACTGGCGATCAAGCGTCTTGCCGATCAGTTACGTCGAATGGAAGGCGAGCTGG
AATCACAGATTATTGCCAAACATGGTTCAGAGAATTCGCGTTATGCCGACTTTGACCCGCTGGAAATGGACCAGTATTCG
TCGCTCAACCAGCTGTCCAAATCACTGGCAGAATCTGCATCGGATTTGGTCGACTTCAAGAGTACGCTTGCCGACAAGAT
TCGCGAAACCGAAGGACTGTTATTGCAACAATCCCGTATTCAGGCCGAGATTCAGGAAAGCCTGATGCGTACCCGTCTGG
TCCCATTTGACCGGATGTTGCCGCGTTTACAGCGTATCGTGCGCCAAACCTCGACTACCTTGAACCGTCCTGCAGAACTG
ATCGTACAGAATACCGAAGGTGAACTGGACCGTAATATTCTCGAGCGTCTGGTCACCCCATTTGAGCATATGCTGCGTAA
CGCGATTGACCATGGTCTGGAAGATACGACAGATCGTATCGCACTGAACAAGCCGGAAGTCGGTTCTATTGTCTTGAACA
TCAGCCGTCAGGGAACCGATGTAATCGTGTCCTTTAGTGATGATGGTAAGGGGATTAATGCAGAGAAGATTCGTGAAAAA
GCGCTGAGTCTGGATCTGATCAAAGCGGATCAAGTCATTGATCAGGAAGAAATCCTGCAATTTATCTTCCATCCTGGTTT
CAGTACCGCGAAAGCAGTCACCCAGATTTCTGGTCGTGGTGTCGGTCTGGACGTGGTACAAAGCGAGATCAAATCGCTGG
GCGGTCATGTGTCAGTGAGTTCGGAACTGGGCAAGGGCACGGTCTTTACGATTCGCGTACCGACGACCGTAGCGGTCAGC
GATGCCTTGATGGTGAAAGTGGGCGATCAGCAATATGCGATTTCTCTGGCGCAGATTGACCGAATCGTGCGTATTGCGCC
GACCACATTGGAAAGCTATTTCAACAGTAAAGATGACTATTTCAAGATCGATGGCGCAAACTATAAGTTGCGTTATCTGT
CTGAGTTTGTTGGCAACCAGCCGATTCCACGTCTTAATAATGTTGGACATTCATTGCCGGTGCTGTTGATCAAAGGAAAT
AGTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGGTTGGTTCACGAGCGCAGATTGTAGTGAAACCGATTGGACAGCA
GTTTGCCAATGTCGGAGTGGTGGCTGGTGCCACGATTCTGGGTGATGGTCAGGTCTGTCTGATTCTCGATGGACAGAATG
TTGCCCGCCAGATTCAGGCGACACAGCGTGTCAAACAGCTGAATGATCAGCGTGATGGTTCGCGTAATTCCAATGCACGT
CGTCTGGTGATGATTGTCGATGACTCGGTGACTGTACGTAAAGTGACGTCGCGTCTGCTGGAACGTCAAGGCTATGATAT
TGTCACTGCCAAAGATGGCGTAGATGCGATCGAACAGCTCGAAAACGTCAGACCGGATCTGATGTTGCTGGATATCGAAA
TGCCACGTATGGACGGTTTCGAAGTGACCAATCTGGTTCGTCACCATGATATTCACCGTGACTTGCCGATTATCATGATT
ACCTCACGTACCGGTGAGAAGCATCGTGAACGTGCATTCAGCCTGGGCGTAACGCATTATATGGGTAAACCGTTCCAGGA
AGCGGAACTGCTGGCCAATATCCAACAACTCATTGCTGAAAAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.406

100

0.624