Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J7649_RS13850 Genome accession   NZ_CP072549
Coordinates   2957895..2958278 (+) Length   127 a.a.
NCBI ID   WP_004280711.1    Uniprot ID   A0AAJ3AH21
Organism   Acinetobacter lwoffii strain H7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2952895..2963278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7649_RS13840 (J7649_13840) - 2955782..2956909 (-) 1128 WP_219308682.1 efflux RND transporter periplasmic adaptor subunit -
  J7649_RS13845 (J7649_13845) - 2956961..2957608 (-) 648 WP_219310132.1 hypothetical protein -
  J7649_RS13850 (J7649_13850) pilG 2957895..2958278 (+) 384 WP_004280711.1 twitching motility response regulator PilG Regulator
  J7649_RS13855 (J7649_13855) - 2958303..2958671 (+) 369 WP_004280710.1 response regulator -
  J7649_RS13860 (J7649_13860) - 2958677..2959213 (+) 537 WP_004280709.1 chemotaxis protein CheW -
  J7649_RS13865 (J7649_13865) - 2959260..2961332 (+) 2073 WP_005106253.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14315.39 Da        Isoelectric Point: 4.7172

>NTDB_id=554144 J7649_RS13850 WP_004280711.1 2957895..2958278(+) (pilG) [Acinetobacter lwoffii strain H7]
MDDKFQNLKIMVIDDSKTIRRTAETLLQREGYEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=554144 J7649_RS13850 WP_004280711.1 2957895..2958278(+) (pilG) [Acinetobacter lwoffii strain H7]
ATGGACGATAAATTCCAAAATCTAAAAATTATGGTTATTGATGACTCAAAGACCATTCGTCGTACTGCGGAAACTCTTCT
TCAACGCGAAGGTTATGAGGTCATTACTGCAGTAGACGGTTTTGAGGCTTTGTCAAAAATTGCCGAAGCAAATCCAGATA
TCGTTTTTGTAGATATTATGATGCCGCGCCTGGATGGTTACCAAACCTGCGCCTTAATCAAAAACTCTCAGAATTACCAG
AATATTCCTGTGATTATGCTATCAAGTAAAGATGGCTTATTTGATCAGGCCAAAGGTCGTGTCGTGGGTTCAGATGAATA
CCTGACTAAACCTTTTAGTAAAGATGAATTGCTCAATGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

45.299

92.126

0.417
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362