Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   J7649_RS05240 Genome accession   NZ_CP072549
Coordinates   1107573..1108280 (-) Length   235 a.a.
NCBI ID   WP_004280141.1    Uniprot ID   A0A2K8USH5
Organism   Acinetobacter lwoffii strain H7     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1102573..1113280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7649_RS05225 (J7649_05225) clpB 1103006..1105585 (-) 2580 WP_219309683.1 ATP-dependent chaperone ClpB -
  J7649_RS05230 (J7649_05230) - 1105841..1106206 (-) 366 WP_219309685.1 antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein -
  J7649_RS05235 (J7649_05235) - 1106351..1107400 (-) 1050 WP_219309687.1 NADP(H)-dependent aldo-keto reductase -
  J7649_RS05240 (J7649_05240) crp 1107573..1108280 (-) 708 WP_004280141.1 cAMP-activated global transcriptional regulator CRP Regulator
  J7649_RS05245 (J7649_05245) - 1108428..1108850 (+) 423 WP_004280142.1 OsmC family protein -
  J7649_RS05250 (J7649_05250) - 1108917..1109954 (-) 1038 WP_219309689.1 metallophosphoesterase -
  J7649_RS05260 (J7649_05260) - 1110420..1112414 (-) 1995 WP_219309691.1 transglutaminaseTgpA domain-containing protein -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26255.96 Da        Isoelectric Point: 4.7275

>NTDB_id=554114 J7649_RS05240 WP_004280141.1 1107573..1108280(-) (crp) [Acinetobacter lwoffii strain H7]
MTSNFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIIDAGSESKSLYLILKGSVSIILREDDDREIVVAYLNAGDF
FGEMGLFEVNPQRTAEVRTRDVCEIAEITYENFHEISKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEEASEAVADGAIDE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=554114 J7649_RS05240 WP_004280141.1 1107573..1108280(-) (crp) [Acinetobacter lwoffii strain H7]
ATGACTTCAAACTTTTCACAATTAAGCACTGATGCGCTTTCTCCGGGGCAATTACCAGAATCCGTGAAAGCACTGTTAAA
ACGTGCATATATTAATCGTTATCCAAAACGTACCACGATCATTGATGCAGGATCAGAATCTAAATCTTTATATTTAATTC
TGAAGGGGTCTGTATCTATCATTCTTCGTGAAGATGATGATCGTGAAATTGTCGTGGCTTATTTAAATGCGGGTGACTTC
TTTGGGGAAATGGGTCTATTCGAGGTTAATCCACAACGTACTGCGGAAGTTCGTACGCGTGATGTGTGTGAAATTGCCGA
AATTACCTATGAAAACTTTCACGAAATCAGCAAGCAATATCCTGATCTGAGCTATGCGGTATTTGCTCAATTAGTACGTC
GTTTGAAAAATACCACACGTAAAGTCACTGATCTGGCATTTATTGATGTTTCAGGCCGGATTGCACGTTGCCTGATCGAC
CTGTCTTCACAGCCAGAAGCGATGATTTTGCCGAATGGCCGTCAGATTCGTATTACCCGTCAGGAAATTGGCCGTATTGT
TGGCTGTTCCCGTGAAATGGTGGGTCGCGTACTGAAAACGCTAGAAGAGCAGGGCATGATCGAAACCGATGGTAAAGCCA
TCCTGATCTTTGATGCTTCACTAGAAGAAGCGTCTGAAGCAGTTGCAGATGGTGCCATAGACGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K8USH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

47.317

87.234

0.413
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4