Detailed information NTG0055396

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: PSEST_RS03450
• Genome accession: NC_019936
• Coordinates: 773884..775221 (-)
• Length: 445 a.a.
• NCBI ID: WP_041756888.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri RCH2
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 768884..780221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSEST_RS03440 (Psest_0703)	-	770972..772567 (-)	1596	WP_015275647.1	response regulator	-
PSEST_RS03445 (Psest_0704)	-	772785..773843 (+)	1059	WP_015275648.1	DUF2333 family protein	-
PSEST_RS03450 (Psest_0705)	pilR	773884..775221 (-)	1338	WP_041756888.1	sigma-54-dependent transcriptional regulator	Regulator
PSEST_RS03455 (Psest_0706)	pilS	775355..776947 (-)	1593	WP_015275650.1	sensor histidine kinase	Regulator
PSEST_RS03460 (Psest_0707)	-	776937..777170 (-)	234	WP_015275651.1	PP0621 family protein	-
PSEST_RS03465 (Psest_0708)	-	777283..778272 (-)	990	WP_015275652.1	outer membrane protein assembly factor BamD	-
PSEST_RS03470 (Psest_0709)	rluD	778478..779452 (+)	975	WP_041756444.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
PSEST_RS03475 (Psest_0710)	pgeF	779449..780186 (+)	738	WP_015275654.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49518.02 Da
• Isoelectric Point: 6.5149

>NTDB_id=55396 PSEST_RS03450 WP_041756888.1 773884..775221(-) (pilR) [Stutzerimonas stutzeri RCH2]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQYIQQQHPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPATEAPVDSRLLGGSPPMKVLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRAEKTFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAASGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIELRVPPLRERREDIRLLADAM
LRRLAQECGDSIAHLHPEALAKLESYRFPGNVRELENMLERAYTLCDGEEIKAGDLRLADSPGSSENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=55396 PSEST_RS03450 WP_041756888.1 773884..775221(-) (pilR) [Stutzerimonas stutzeri RCH2]
ATGACCGCGCGCCAAAAAGCACTGATCATCGACGACGAGCCGGATATTCGCGAGCTGTTGGAAATCACCCTCGGCCGCAT
GAAGCTCGACACCCGCAGCGCGCGCAATCTCAAGGAAGCGCGCGAACTGCTGGCCCGCGAGCATTACGACCTGTGCCTGA
CCGACATGCGCCTGCCTGACGGTAGCGGCCTGGAACTGGTGCAATACATCCAGCAGCAGCACCCGCAACTGCCGGTGGCG
ATGATCACCGCCTACGGCAGCCTGGACACCGCGATCGGCGCACTCAAGGCCGGTGCGTTCGACTTTCTCACCAAACCGGT
GGACCTCAATCGCTTGCGCGAACTGGTCAGCACTGCCCTGCGCCTGCGTGCGCCGGCCACGGAGGCGCCGGTAGACAGCC
GGCTGCTGGGCGGCTCACCGCCGATGAAGGTCTTGCGCAAGCAGATCGGCAAGCTCGCGCGCAGTCAGGCGCCGGTGTAT
ATCAGCGGCGAATCCGGCAGCGGCAAGGAGCTGGTGGCCCGCCTGATCCACGAACAAGGGCCACGCGCCGAAAAAACCTT
CGTGCCGGTCAACTGCGGGGCGATTCCTTCCGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGTTTCAGTG
GCGCCATCGAGGACAAGCCGGGCCTGTTCCAGGCCGCCAGTGGCGGCACCCTCTTTCTCGATGAGGTGGCGGATCTGCCA
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATTCAGGAGAAAGCCGTTCGTGCGGTCGGTGGCGCGCAAGAAGTCATGGT
CGATGTGCGCATCCTCTGTGCGACTCACAAGGACCTGGCCGCCGAGGTCGCGGCGGGCCGCTTCCGCCAGGATCTGTACT
ACCGCCTGAACGTGATCGAGCTGCGCGTACCGCCGCTACGCGAGCGCCGCGAGGACATCCGCCTGCTTGCCGATGCCATG
CTCCGGCGCCTGGCCCAGGAATGCGGCGACAGCATCGCCCATCTTCATCCTGAGGCCCTGGCCAAGCTGGAAAGCTACCG
TTTCCCAGGCAACGTGCGCGAACTGGAGAACATGCTCGAGCGCGCCTATACGCTCTGCGATGGGGAGGAGATCAAGGCCG
GGGACTTGCGCCTCGCCGACAGCCCCGGCTCGTCGGAGAACGGCGAGGCCAGCCTGGCGCAAATCGACAATCTGGAAGAT
CACCTGGAAGAGATCGAGCGCAAGCTGATCATGCAGGCTCTCGAAGAAACGCGCTGGAACCGCACAGCGGCAGCCCAGCG
ACTCGGCCTGACCTTCCGCTCGATGCGTTATCGCTTGAAAAAACTCGGCCTGGATTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.36	99.775	0.852
pilR	Acinetobacter baumannii strain A118	49.673	100	0.512
luxO	Vibrio cholerae strain A1552	37.22	100	0.373