Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   J7T60_RS07435 Genome accession   NZ_CP072436
Coordinates   1419728..1420762 (-) Length   344 a.a.
NCBI ID   WP_372433575.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24735     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1414728..1425762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T60_RS07410 (J7T60_07345) ilvD 1414980..1416698 (-) 1719 WP_011226435.1 dihydroxy-acid dehydratase -
  J7T60_RS07415 (J7T60_07350) - 1416811..1417992 (+) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -
  J7T60_RS07425 (J7T60_07360) trmB 1418228..1418869 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  J7T60_RS07430 (J7T60_07365) ccrZ 1418879..1419670 (-) 792 WP_002951667.1 cell cycle regulator CcrZ -
  J7T60_RS07435 (J7T60_07370) pptB 1419728..1420762 (-) 1035 WP_372433575.1 ABC transporter permease Regulator
  J7T60_RS07440 (J7T60_07375) pptA 1420762..1421493 (-) 732 WP_372433425.1 ABC transporter ATP-binding protein Regulator
  J7T60_RS07445 (J7T60_07380) - 1421558..1421977 (+) 420 WP_179971025.1 HIT family protein -
  J7T60_RS07450 (J7T60_07385) - 1421974..1422282 (+) 309 WP_096811620.1 hypothetical protein -
  J7T60_RS07455 - 1422324..1422485 (-) 162 WP_232085674.1 hypothetical protein -
  J7T60_RS07460 - 1422834..1423004 (-) 171 WP_011226439.1 hypothetical protein -
  J7T60_RS07465 (J7T60_07395) - 1423074..1423709 (-) 636 WP_179971026.1 DUF4230 domain-containing protein -
  J7T60_RS07470 - 1423728..1423853 (-) 126 WP_011681534.1 hypothetical protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40085.60 Da        Isoelectric Point: 10.5363

>NTDB_id=553000 J7T60_RS07435 WP_372433575.1 1419728..1420762(-) (pptB) [Streptococcus thermophilus strain S24735]
MAELFKERSRRFTTRCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLRHFPKNPWAIILGLLVLCLLLPFWGNIATYLEP
ADKHYLLVKEEEVLDHIKKATGCAFRFWVLIQTLIFILVVPLFLALGLPVWRVVLVAVAMAILKYFIFQKKAQPFYKQSG
LNWTDAIAAENKRQQSILKFFSLFTNVKGITSSVKRRGYLDGILKRTKKDKKYTWYNLYLRAFLRSGDYFALSLRLFALT
LLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPIGKDMQVSNLKRLINQIVLVMTLIQALCLFDLKFS
LILVGVMLVLSLVYLPAKLKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=553000 J7T60_RS07435 WP_372433575.1 1419728..1420762(-) (pptB) [Streptococcus thermophilus strain S24735]
ATAGCTGAGCTTTTTAAGGAGCGTAGCAGACGATTCACTACCCGTTGTGCTAAGTATAGTCGCTACGTCTTTAATGACCA
CTTTATCCTGGTTCTTCTTTTTTTGCTGGGTTTTGTCTTGGTTCAGTATAGCCAGTTGCTCCGACATTTTCCAAAGAATC
CATGGGCCATCATTCTTGGCTTACTTGTGCTTTGTCTCTTACTGCCTTTTTGGGGCAATATTGCCACCTATTTAGAGCCT
GCAGACAAGCACTACCTCTTAGTTAAGGAAGAAGAGGTGCTAGACCATATTAAGAAGGCGACAGGGTGTGCTTTTAGATT
TTGGGTGCTCATCCAGACCTTGATTTTTATCTTGGTCGTCCCACTCTTTCTGGCCTTGGGTCTTCCAGTTTGGAGAGTTG
TCCTTGTAGCCGTGGCTATGGCTATTCTTAAGTATTTTATTTTCCAAAAGAAAGCACAACCTTTTTATAAGCAGTCTGGG
TTGAATTGGACTGATGCTATTGCAGCGGAGAATAAACGACAACAATCAATCTTGAAGTTTTTCTCACTTTTTACCAATGT
TAAGGGAATTACATCGAGTGTTAAACGCCGTGGCTATTTGGATGGCATTCTCAAGCGTACAAAGAAAGACAAGAAATATA
CGTGGTACAACCTGTACCTGAGAGCCTTCTTACGTTCAGGAGATTACTTTGCCCTTAGCCTACGCCTTTTTGCTTTAACA
CTTTTGGTTATTTTTTTGGTTCCTGAAAAATGGCTGGCTATGGTACTTGTGGTTGTTTTTGACTATCTCTTACTCTTCCA
GCTCACAGCGCTTAAATCGCACTTTGCTTACCAAAGGATGGCCAACCTTATGCCAATTGGAAAAGACATGCAGGTGAGCA
ATCTTAAGCGCTTGATTAATCAAATTGTCCTTGTAATGACACTGATTCAGGCTCTTTGTCTCTTTGACCTTAAATTTAGC
CTGATTTTGGTTGGAGTTATGCTAGTTTTGAGCCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

98.547

100

0.985

  pptB Streptococcus salivarius strain HSISS4

93.023

100

0.93