Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   J7T60_RS07440 Genome accession   NZ_CP072436
Coordinates   1420762..1421493 (-) Length   243 a.a.
NCBI ID   WP_372433425.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24735     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1415762..1426493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T60_RS07415 (J7T60_07350) - 1416811..1417992 (+) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -
  J7T60_RS07425 (J7T60_07360) trmB 1418228..1418869 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  J7T60_RS07430 (J7T60_07365) ccrZ 1418879..1419670 (-) 792 WP_002951667.1 cell cycle regulator CcrZ -
  J7T60_RS07435 (J7T60_07370) pptB 1419728..1420762 (-) 1035 WP_372433575.1 ABC transporter permease Regulator
  J7T60_RS07440 (J7T60_07375) pptA 1420762..1421493 (-) 732 WP_372433425.1 ABC transporter ATP-binding protein Regulator
  J7T60_RS07445 (J7T60_07380) - 1421558..1421977 (+) 420 WP_179971025.1 HIT family protein -
  J7T60_RS07450 (J7T60_07385) - 1421974..1422282 (+) 309 WP_096811620.1 hypothetical protein -
  J7T60_RS07455 - 1422324..1422485 (-) 162 WP_232085674.1 hypothetical protein -
  J7T60_RS07460 - 1422834..1423004 (-) 171 WP_011226439.1 hypothetical protein -
  J7T60_RS07465 (J7T60_07395) - 1423074..1423709 (-) 636 WP_179971026.1 DUF4230 domain-containing protein -
  J7T60_RS07470 - 1423728..1423853 (-) 126 WP_011681534.1 hypothetical protein -
  J7T60_RS07475 (J7T60_07400) - 1424262..1426361 (-) 2100 WP_022096464.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26860.11 Da        Isoelectric Point: 4.4606

>NTDB_id=553001 J7T60_RS07440 WP_372433425.1 1420762..1421493(-) (pptA) [Streptococcus thermophilus strain S24735]
MLKLEKVTGGYANILVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHILDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=553001 J7T60_RS07440 WP_372433425.1 1420762..1421493(-) (pptA) [Streptococcus thermophilus strain S24735]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCTCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
CGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTATTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAATCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACATTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

99.177

100

0.992
  pptA Streptococcus salivarius strain HSISS4

96.296

100

0.963