Detailed information NTG0552846

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: LXA49_RS09685
• Genome accession: NZ_CP089949
• Coordinates: 1883753..1884652 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SN75752
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1878753..1889652

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXA49_RS09660 (LXA49_09645)	rsmA	1879083..1879955 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
LXA49_RS09665 (LXA49_09650)	-	1880086..1880394 (-)	309	WP_000333257.1	hypothetical protein	-
LXA49_RS09670 (LXA49_09655)	-	1880387..1881028 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
LXA49_RS09675 (LXA49_09660)	-	1881030..1883060 (-)	2031	WP_000825257.1	bacteriocin-associated integral membrane family protein	-
LXA49_RS09680 (LXA49_09665)	-	1883137..1883433 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
LXA49_RS09685 (LXA49_09670)	comR	1883753..1884652 (-)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
LXA49_RS09690 (LXA49_09675)	rnmV	1884724..1885284 (-)	561	WP_000664448.1	ribonuclease M5	-
LXA49_RS09695 (LXA49_09680)	-	1885284..1886057 (-)	774	WP_000575638.1	TatD family hydrolase	-
LXA49_RS09700 (LXA49_09685)	-	1886362..1887255 (-)	894	Protein_1923	cell wall surface anchor protein	-
LXA49_RS09705 (LXA49_09690)	rpmH	1887539..1887673 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
LXA49_RS09710 (LXA49_09695)	-	1887818..1889032 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
LXA49_RS09715 (LXA49_09700)	-	1889188..1889482 (-)	295	Protein_1926	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=552846 LXA49_RS09685 WP_000904833.1 1883753..1884652(-) (comR) [Streptococcus pneumoniae strain SN75752]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=552846 LXA49_RS09685 WP_000904833.1 1883753..1884652(-) (comR) [Streptococcus pneumoniae strain SN75752]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361