Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   J7T77_RS06800 Genome accession   NZ_CP072430
Coordinates   1304288..1305373 (-) Length   361 a.a.
NCBI ID   WP_011226304.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24746     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1299288..1310373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T77_RS06770 (J7T77_06655) - 1299654..1300469 (-) 816 WP_011226298.1 Cof-type HAD-IIB family hydrolase -
  J7T77_RS06775 (J7T77_06660) - 1300462..1301256 (-) 795 WP_011681412.1 HAD-IIB family hydrolase -
  J7T77_RS06780 (J7T77_06665) - 1301440..1301817 (+) 378 WP_011681413.1 GntR family transcriptional regulator -
  J7T77_RS06785 (J7T77_06670) - 1301822..1302520 (+) 699 WP_014608540.1 ABC transporter ATP-binding protein -
  J7T77_RS06790 (J7T77_06675) - 1302532..1303316 (+) 785 Protein_1283 ABC transporter permease -
  J7T77_RS06795 (J7T77_06680) amiF 1303366..1304295 (-) 930 WP_011681415.1 ATP-binding cassette domain-containing protein Regulator
  J7T77_RS06800 (J7T77_06685) amiE 1304288..1305373 (-) 1086 WP_011226304.1 ABC transporter ATP-binding protein Regulator
  J7T77_RS06805 (J7T77_06690) amiD 1305383..1306309 (-) 927 WP_002946409.1 oligopeptide ABC transporter permease OppC Regulator
  J7T77_RS06810 (J7T77_06695) amiC 1306309..1307802 (-) 1494 WP_179970628.1 ABC transporter permease Regulator
  J7T77_RS06815 (J7T77_06700) amiA3 1307863..1309836 (-) 1974 WP_372589652.1 peptide ABC transporter substrate-binding protein Regulator
  J7T77_RS06820 (J7T77_06705) - 1310073..1310263 (-) 191 Protein_1289 IS3 family transposase -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39864.62 Da        Isoelectric Point: 4.7435

>NTDB_id=552704 J7T77_RS06800 WP_011226304.1 1304288..1305373(-) (amiE) [Streptococcus thermophilus strain S24746]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=552704 J7T77_RS06800 WP_011226304.1 1304288..1305373(-) (amiE) [Streptococcus thermophilus strain S24746]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus thermophilus LMG 18311

100

100

1

  amiE Streptococcus thermophilus LMD-9

100

100

1

  amiE Streptococcus salivarius strain HSISS4

96.953

100

0.97

  oppD Streptococcus mutans UA159

54.441

96.676

0.526