Detailed information    

insolico Bioinformatically predicted

Overview


Name   sinI   Type   Regulator
Locus tag   A7A1_RS08560 Genome accession   NC_019896
Coordinates   1648571..1648744 (-) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context


Location: 1643571..1653744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS08515 (A7A1_3572) comGE 1643921..1644268 (+) 348 WP_003230165.1 ComG operon protein 5 Machinery gene
  A7A1_RS08520 (A7A1_3573) comGF 1644294..1644677 (+) 384 WP_015251713.1 ComG operon protein ComGF Machinery gene
  A7A1_RS08525 (A7A1_3574) comGG 1644678..1645052 (+) 375 WP_015251714.1 ComG operon protein ComGG Machinery gene
  A7A1_RS08530 (A7A1_3575) spoIITA 1645123..1645303 (+) 181 Protein_1684 YqzE family protein -
  A7A1_RS08535 (A7A1_3576) yqzG 1645345..1645671 (-) 327 WP_003246051.1 YqzG/YhdC family protein -
  A7A1_RS08540 (A7A1_3577) tapA 1645943..1646704 (+) 762 WP_015251716.1 amyloid fiber anchoring/assembly protein TapA -
  A7A1_RS08545 (A7A1_3578) sipW 1646688..1647260 (+) 573 WP_003246088.1 signal peptidase I SipW -
  A7A1_RS08550 (A7A1_3579) tasA 1647324..1648109 (+) 786 WP_015251717.1 biofilm matrix protein TasA -
  A7A1_RS08555 (A7A1_3580) sinR 1648202..1648537 (-) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  A7A1_RS08560 (A7A1_3581) sinI 1648571..1648744 (-) 174 WP_003230187.1 anti-repressor SinI Regulator
  A7A1_RS08565 (A7A1_3582) yqhG 1648927..1649721 (-) 795 WP_003230200.1 YqhG family protein -
  A7A1_RS08570 (A7A1_3583) hepAA 1649742..1651414 (-) 1673 Protein_1692 SNF2-related protein -
  A7A1_RS08575 (A7A1_3585) gcvT 1651856..1652944 (+) 1089 WP_015251720.1 glycine cleavage system aminomethyltransferase GcvT -

Sequence


Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=55241 A7A1_RS08560 WP_003230187.1 1648571..1648744(-) (sinI) [Bacillus subtilis subsp. subtilis str. BSP1]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=55241 A7A1_RS08560 WP_003230187.1 1648571..1648744(-) (sinI) [Bacillus subtilis subsp. subtilis str. BSP1]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains


Predicted by InterproScan.

(11-36)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment