Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LRP95_RS02040 Genome accession   NZ_CP089745
Coordinates   438608..439015 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain Pa608     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 433608..444015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LRP95_RS02010 - 433656..434660 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  LRP95_RS02015 pyrR 434684..435196 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LRP95_RS02020 ruvX 435308..435742 (-) 435 WP_003121753.1 Holliday junction resolvase RuvX -
  LRP95_RS02025 - 435742..436311 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  LRP95_RS02030 - 436360..437253 (-) 894 WP_003160914.1 energy transducer TonB -
  LRP95_RS02035 gshB 437400..438353 (-) 954 WP_014602389.1 glutathione synthase -
  LRP95_RS02040 pilG 438608..439015 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  LRP95_RS02045 pilH 439062..439427 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  LRP95_RS02050 - 439478..440014 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  LRP95_RS02055 pilJ 440099..442147 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  LRP95_RS02060 pilK 442208..443083 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=552290 LRP95_RS02040 WP_003084583.1 438608..439015(+) (pilG) [Pseudomonas aeruginosa strain Pa608]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=552290 LRP95_RS02040 WP_003084583.1 438608..439015(+) (pilG) [Pseudomonas aeruginosa strain Pa608]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACTCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385