Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   A7A1_RS01875 Genome accession   NC_019896
Coordinates   359552..359671 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 354552..364671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS01855 (A7A1_0170) pbpG 354923..356997 (-) 2075 Protein_368 transglycosylase domain-containing protein -
  A7A1_RS01860 (A7A1_0169) speE 357199..358029 (+) 831 WP_003227543.1 spermidine synthase -
  A7A1_RS01865 (A7A1_0168) speB 358090..358962 (+) 873 WP_015250983.1 agmatinase -
  A7A1_RS01870 (A7A1_0167) ywhH 358994..359456 (-) 463 Protein_371 YbaK/EbsC family protein -
  A7A1_RS01875 (A7A1_0166) phrF 359552..359671 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  A7A1_RS01880 (A7A1_0165) rapF 359655..360800 (-) 1146 WP_015250985.1 response regulator aspartate phosphatase RapF Regulator
  A7A1_RS01890 (A7A1_0164) ywhK 361030..362385 (+) 1356 WP_015250986.1 YncE family protein -
  A7A1_RS01895 (A7A1_0163) ywhL 362424..363800 (+) 1377 WP_015250987.1 YncE family protein -
  A7A1_RS01900 (A7A1_0162) albG 363806..364507 (-) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=55204 A7A1_RS01875 WP_009968329.1 359552..359671(-) (phrF) [Bacillus subtilis subsp. subtilis str. BSP1]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=55204 A7A1_RS01875 WP_009968329.1 359552..359671(-) (phrF) [Bacillus subtilis subsp. subtilis str. BSP1]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment