Detailed information NTG0055205

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: A7A1_RS01880
• Genome accession: NC_019896
• Coordinates: 359655..360800 (-)
• Length: 381 a.a.
• NCBI ID: WP_015250985.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. BSP1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 354655..365800

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7A1_RS01855 (A7A1_0170)	pbpG	354923..356997 (-)	2075	Protein_368	transglycosylase domain-containing protein	-
A7A1_RS01860 (A7A1_0169)	speE	357199..358029 (+)	831	WP_003227543.1	spermidine synthase	-
A7A1_RS01865 (A7A1_0168)	speB	358090..358962 (+)	873	WP_015250983.1	agmatinase	-
A7A1_RS01870 (A7A1_0167)	ywhH	358994..359456 (-)	463	Protein_371	YbaK/EbsC family protein	-
A7A1_RS01875 (A7A1_0166)	phrF	359552..359671 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
A7A1_RS01880 (A7A1_0165)	rapF	359655..360800 (-)	1146	WP_015250985.1	response regulator aspartate phosphatase RapF	Regulator
A7A1_RS01890 (A7A1_0164)	ywhK	361030..362385 (+)	1356	WP_015250986.1	YncE family protein	-
A7A1_RS01895 (A7A1_0163)	ywhL	362424..363800 (+)	1377	WP_015250987.1	YncE family protein	-
A7A1_RS01900 (A7A1_0162)	albG	363806..364507 (-)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
A7A1_RS01905 (A7A1_0161)	albF	364504..365784 (-)	1281	WP_015250989.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45590.06 Da
• Isoelectric Point: 5.0624

>NTDB_id=55205 A7A1_RS01880 WP_015250985.1 359655..360800(-) (rapF) [Bacillus subtilis subsp. subtilis str. BSP1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=55205 A7A1_RS01880 WP_015250985.1 359655..360800(-) (rapF) [Bacillus subtilis subsp. subtilis str. BSP1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGGCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572