Detailed information NTG0552032

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: J4854_RS02250
• Genome accession: NZ_CP072329
• Coordinates: 424730..425656 (+)
• Length: 308 a.a.
• NCBI ID: WP_200773093.1
• Uniprot ID: -
• Organism: Streptococcus lactarius strain CCUG 66490
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 419730..430656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4854_RS02235 (J4854_02235)	amiC	421215..422714 (+)	1500	WP_200773096.1	ABC transporter permease	Regulator
J4854_RS02240 (J4854_02240)	amiD	422714..423640 (+)	927	WP_200773095.1	oligopeptide ABC transporter permease OppC	Regulator
J4854_RS02245 (J4854_02245)	amiE	423652..424719 (+)	1068	WP_200773094.1	ABC transporter ATP-binding protein	Regulator
J4854_RS02250 (J4854_02250)	amiF	424730..425656 (+)	927	WP_200773093.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34987.96 Da
• Isoelectric Point: 6.5820

>NTDB_id=552032 J4854_RS02250 WP_200773093.1 424730..425656(+) (amiF) [Streptococcus lactarius strain CCUG 66490]
MTEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGEIYYGGRKINGKNTHS
EKSELLRKIQMIFQDPAASLNERATVDYIISEGLYNHHLFNSEEERQEKVKNIMHEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMEPEFVIADEPISALDVSVRAQVLNLLKKFQRELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
HPIHPYTQSLLSAVPIPDPILERKKVLKIYDPEQHDYSEDKPQMVEIKPGHYVWANKAEESKYRQAYK

Nucleotide

• Length: 927 bp

>NTDB_id=552032 J4854_RS02250 WP_200773093.1 424730..425656(+) (amiF) [Streptococcus lactarius strain CCUG 66490]
ATGACTGAAAAATTAGTTGAAATTAAAGATTTAGAAATTTCCTTCGGTGAAGGAAGTAAAAAATTCGTTGCTGTTAAAAA
TGCAAACTTTTTCATTAACAAGGGGGAAACATTCTCTCTTGTAGGTGAATCAGGAAGTGGTAAAACAACAATCGGACGTG
CGATCATTGGTCTGAATGATACAAGTGCTGGAGAAATTTACTACGGTGGTCGTAAGATCAACGGTAAAAATACTCACAGT
GAAAAGTCTGAGTTGCTCCGGAAGATTCAAATGATCTTCCAAGATCCAGCTGCCAGTTTGAATGAGCGTGCAACTGTCGA
CTATATCATATCTGAAGGTTTGTACAACCATCATTTATTTAATAGTGAAGAAGAGCGCCAGGAAAAAGTAAAGAATATCA
TGCATGAAGTCGGTCTTCTTGCAGAACATTTGACACGTTACCCTCACGAATTCTCAGGTGGTCAACGTCAACGGATCGGT
ATTGCCCGTGCACTTGTCATGGAGCCAGAATTTGTCATTGCGGATGAACCAATCTCAGCCCTTGACGTTTCAGTACGTGC
GCAGGTATTGAACCTTTTGAAAAAATTCCAAAGAGAATTAGGCTTGACCTACCTCTTTATCGCCCATGACTTGTCAGTTG
TGCGCTTCATTTCTGATCGTATTGCAGTTATCTATAAAGGGGTTATCGTCGAAGTAGCAGAAACTGAAGAGCTATTTAAC
CACCCAATCCATCCATATACGCAATCACTTCTCTCAGCGGTTCCAATTCCAGATCCAATTCTAGAACGTAAAAAAGTTCT
AAAAATCTACGATCCAGAACAACATGACTACTCTGAAGATAAACCACAAATGGTTGAAATCAAACCAGGACATTATGTCT
GGGCTAATAAAGCAGAAGAAAGTAAATATAGACAAGCTTACAAATGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	83.279	99.026	0.825
amiF	Streptococcus salivarius strain HSISS4	83.279	99.026	0.825
amiF	Streptococcus thermophilus LMD-9	82.951	99.026	0.821