Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   ANG_RS10040 Genome accession   NZ_AP013072
Coordinates   2018433..2018759 (-) Length   108 a.a.
NCBI ID   WP_020999447.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2013433..2023759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS10025 (ANG_2034) glmS 2013945..2015759 (-) 1815 WP_020999448.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -
  ANG_RS10030 (ANG_2035) - 2016149..2017348 (-) 1200 WP_003035323.1 acetate kinase -
  ANG_RS10035 (ANG_2036) - 2017395..2018348 (-) 954 Protein_1984 class I SAM-dependent methyltransferase -
  ANG_RS10040 (ANG_2037) comGG/cglG 2018433..2018759 (-) 327 WP_020999447.1 competence type IV pilus minor pilin ComGG Machinery gene
  ANG_RS10045 (ANG_2038) comGF/cglF 2018740..2019177 (-) 438 WP_003035329.1 competence type IV pilus minor pilin ComGF Machinery gene
  ANG_RS10050 (ANG_2039) comGE/cglE 2019161..2019454 (-) 294 WP_003035318.1 competence type IV pilus minor pilin ComGE Machinery gene
  ANG_RS10055 (ANG_2040) comGD 2019426..2019854 (-) 429 WP_020999411.1 competence type IV pilus minor pilin ComGD Machinery gene
  ANG_RS10060 (ANG_2041) comGC 2019814..2020131 (-) 318 WP_020998068.1 competence type IV pilus major pilin ComGC Machinery gene
  ANG_RS10065 (ANG_2042) comGB 2020128..2021150 (-) 1023 WP_038677372.1 competence type IV pilus assembly protein ComGB Machinery gene
  ANG_RS10070 (ANG_2043) comGA 2021092..2022033 (-) 942 WP_006268058.1 competence type IV pilus ATPase ComGA Machinery gene
  ANG_RS10075 (ANG_2044) - 2022103..2022468 (-) 366 WP_022525692.1 DUF1033 family protein -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12863.68 Da        Isoelectric Point: 10.2346

>NTDB_id=55155 ANG_RS10040 WP_020999447.1 2018433..2018759(-) (comGG/cglG) [Streptococcus anginosus subsp. whileyi MAS624]
MWKQRVKAGIMLYALFITAVFSLLLQFYLHRQTANHRNFTLNRERIQAYAMAAVANENPKQRNFEQGYVQDQKDEKGFIL
TVTMNTGRRYQFRFPLMHSNQTNDNLDE

Nucleotide


Download         Length: 327 bp        

>NTDB_id=55155 ANG_RS10040 WP_020999447.1 2018433..2018759(-) (comGG/cglG) [Streptococcus anginosus subsp. whileyi MAS624]
GTGTGGAAACAAAGAGTTAAAGCAGGTATTATGCTCTATGCCCTTTTTATAACAGCTGTCTTTAGCTTACTTTTGCAATT
TTACCTTCATCGGCAAACTGCAAATCACAGGAATTTCACCCTAAACCGAGAGCGAATACAGGCTTATGCAATGGCAGCTG
TAGCAAATGAAAATCCTAAACAAAGGAATTTTGAACAGGGGTATGTGCAAGATCAGAAAGATGAGAAAGGGTTCATCCTG
ACAGTAACAATGAACACTGGTCGCCGTTATCAATTTCGCTTCCCACTTATGCATTCCAATCAAACCAATGACAATTTAGA
CGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus pneumoniae Rx1

43

92.593

0.398
  comGG/cglG Streptococcus pneumoniae D39

43

92.593

0.398
  comGG/cglG Streptococcus pneumoniae R6

43

92.593

0.398
  comGG/cglG Streptococcus pneumoniae TIGR4

43

92.593

0.398
  comGG/cglG Streptococcus mitis NCTC 12261

42.424

91.667

0.389
  comGG/cglG Streptococcus mitis SK321

41.414

91.667

0.38

Multiple sequence alignment