Detailed information NTG0055153

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: ANG_RS10020
• Genome accession: NZ_AP013072
• Coordinates: 2011376..2013505 (-)
• Length: 709 a.a.
• NCBI ID: WP_025272013.1
• Uniprot ID: -
• Organism: Streptococcus anginosus subsp. whileyi MAS624
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 2006376..2018505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ANG_RS09990 (ANG_2027)	-	2006469..2007170 (-)	702	WP_003070771.1	L-ribulose-5-phosphate 4-epimerase	-
ANG_RS09995 (ANG_2028)	-	2007172..2008032 (-)	861	WP_003035309.1	L-ribulose-5-phosphate 3-epimerase	-
ANG_RS10000 (ANG_2029)	-	2008036..2008701 (-)	666	WP_025272010.1	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	-
ANG_RS10005 (ANG_2030)	-	2008749..2009234 (-)	486	WP_020999451.1	PTS sugar transporter subunit IIA	-
ANG_RS10010 (ANG_2031)	-	2009437..2009718 (-)	282	WP_025272011.1	PTS sugar transporter subunit IIB	-
ANG_RS10015 (ANG_2032)	-	2009749..2011209 (-)	1461	WP_025272012.1	PTS ascorbate transporter subunit IIC	-
ANG_RS10020 (ANG_2033)	clpC	2011376..2013505 (-)	2130	WP_025272013.1	AAA family ATPase	Regulator
ANG_RS10025 (ANG_2034)	glmS	2013945..2015759 (-)	1815	WP_020999448.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
ANG_RS10030 (ANG_2035)	-	2016149..2017348 (-)	1200	WP_003035323.1	acetate kinase	-
ANG_RS10035 (ANG_2036)	-	2017395..2018348 (-)	954	Protein_1984	class I SAM-dependent methyltransferase	-

Sequence

Protein

• Length: 709 a.a.
• Molecular weight: 78673.81 Da
• Isoelectric Point: 4.7814

>NTDB_id=55153 ANG_RS10020 WP_025272013.1 2011376..2013505(-) (clpC) [Streptococcus anginosus subsp. whileyi MAS624]
MNNNYNNFDNMDDLFNQLMGRMGGFNSENRRYLINGREVTPEEFAQYRATGKLPKQAVEGQNPQMQGQAGAPKQDGILAK
LGRNLTEEARQDMLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISVDIS
GLEAGTQYRGSFEENIQNLVSEVKEAGNVILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGDLTVIGATTQDEYRN
TILKNAALARRFNEVKVIAPSAEDTYKILLGIRDLYEKHHNVILPDEVLKAAVDYSIQYIPQRSLPDKAIDLVDVTAAHL
AAQHPVTDVHAVEREIAEQKAKQEAAVEKEDFETALNAKMRIEELEKKIENHTEDMKVTATVNDVAESVERMTGIPVSQM
GSSDIERLKELNARLKTKVIGQNEAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKEAIIR
LDMSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFK
NTVIIATSNAGFGYESFTGDEEKDMKIMDRLKPYFRPEFLNRFNAVIEFSHLGKEDLAEIVDLMLDEVNQTLAKKDITLT
VTDAAKHYLAEEGYDEVMGVRPLRRVIEQQIRDKVTDYHLDHLDAKHLLADLKDDELVIEEAKEHQTKK

Nucleotide

• Length: 2130 bp

>NTDB_id=55153 ANG_RS10020 WP_025272013.1 2011376..2013505(-) (clpC) [Streptococcus anginosus subsp. whileyi MAS624]
ATGAACAACAACTACAACAACTTTGATAACATGGATGATCTTTTCAACCAATTGATGGGAAGAATGGGCGGTTTTAATAG
TGAAAATCGACGTTATCTCATCAATGGACGTGAAGTAACACCAGAAGAATTTGCACAATACCGAGCAACGGGAAAACTGC
CGAAACAAGCAGTAGAGGGTCAAAATCCGCAAATGCAAGGGCAAGCAGGTGCTCCAAAACAAGACGGCATTTTAGCAAAA
TTGGGTCGCAATTTGACAGAAGAAGCGCGCCAAGATATGCTAGATCCTGTTATTGGGCGCAATAAGGAAATTCAAGAAAC
AGCAGAAATTCTGTCTCGTCGGACGAAGAATAATCCAGTGCTAGTCGGAGATGCTGGGGTTGGTAAGACCGCAGTTGTCG
AAGGTTTGGCACAAGCGATTGTCAACGGCGATGTCCCTGCTGCTATTAAAAATAAGGAAATTATTTCTGTAGATATTTCT
GGCTTAGAAGCAGGTACGCAATATCGCGGCAGTTTTGAAGAGAATATTCAAAATCTGGTATCTGAAGTGAAAGAAGCGGG
TAATGTCATTCTCTTCTTTGATGAAATTCATCAAATCCTTGGTGCTGGAAGCACAGGTGGAGACAGCGGCTCTAAAGGTT
TGGCAGACATTTTGAAACCAGCTCTTTCTCGTGGGGATTTAACGGTGATTGGTGCGACGACGCAAGATGAATACCGCAAT
ACCATTTTGAAAAATGCGGCTTTGGCTCGCCGTTTCAATGAAGTAAAAGTAATTGCTCCGTCTGCAGAAGATACTTATAA
GATTTTGCTAGGAATTCGTGATTTGTACGAAAAACACCACAATGTTATCTTGCCAGATGAAGTGTTAAAAGCGGCCGTGG
ACTATTCGATTCAATATATTCCGCAACGCAGTTTGCCAGATAAAGCGATTGACCTAGTGGATGTGACAGCAGCTCATTTG
GCAGCTCAACACCCTGTTACAGACGTACACGCCGTGGAACGTGAAATCGCAGAGCAAAAGGCCAAACAAGAAGCTGCAGT
TGAAAAAGAAGATTTTGAAACGGCTTTGAATGCTAAGATGCGCATTGAAGAGCTGGAAAAGAAAATTGAAAATCATACAG
AAGACATGAAAGTGACAGCAACTGTCAATGATGTGGCAGAGTCTGTAGAGCGCATGACGGGTATTCCTGTTTCTCAAATG
GGCAGCAGCGATATTGAGCGCTTGAAAGAACTGAATGCGCGCTTGAAGACAAAAGTCATTGGACAAAATGAAGCAGTTGA
AGCGGTGGCGCGCGCTATTCGTCGGAATCGTGCAGGTTTTGATGAAGGAAACCGTCCAATTGGTAGCTTCCTCTTTGTCG
GCCCGACTGGTGTTGGAAAAACAGAGCTAGCGAAGCAATTAGCGCTTGATATGTTTGGTACTAAAGAAGCCATTATCCGT
TTGGACATGTCTGAATACTCTGACCGCACGGCTGTGTCGAAGTTGATTGGTACAACAGCTGGTTATGTGGGATATGATGA
CAACAGCAATACCTTGACAGAACGTGTTCGTCGGAATCCATACTCAATCATTTTATTAGACGAAATTGAAAAGGCCGATC
CACAAGTCATCACGCTGTTACTGCAAGTCTTAGATGATGGACGTTTGACAGACGGTCAAGGAAACACTGTCAACTTTAAG
AATACGGTTATTATCGCTACTTCTAACGCAGGATTTGGTTATGAAAGCTTTACAGGCGACGAAGAAAAGGATATGAAAAT
TATGGATCGGTTGAAACCATACTTCCGTCCAGAATTCTTGAACCGGTTCAATGCGGTTATTGAATTCTCTCATCTTGGTA
AAGAGGATTTAGCTGAAATCGTCGACTTGATGTTGGATGAAGTCAACCAAACACTTGCCAAGAAAGACATCACGTTAACA
GTAACAGATGCAGCCAAACATTATCTAGCAGAAGAGGGATATGATGAAGTTATGGGTGTTCGTCCGCTTCGTCGTGTGAT
TGAGCAACAAATCCGTGATAAGGTAACAGACTATCATCTTGATCATTTAGATGCGAAACATCTTCTTGCAGATTTGAAAG
ATGATGAATTAGTTATCGAAGAAGCGAAAGAGCATCAAACTAAAAAATAA

Domains

Predicted by InterProScan.

• AAA lid domain (AAA_lid_9) (261-355)

• AAA domain (Cdc48 subfamily) (AAA_2) (445-605)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (612-682)

• ATPase family associated with various cellular activities (AAA) (AAA) (120-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Lactococcus lactis subsp. cremoris KW2	50.456	92.807	0.468
clpE	Streptococcus pneumoniae Rx1	45.768	98.307	0.45
clpE	Streptococcus pneumoniae D39	45.768	98.307	0.45
clpE	Streptococcus pneumoniae R6	45.768	98.307	0.45
clpE	Streptococcus pneumoniae TIGR4	45.533	97.884	0.446
clpE	Streptococcus mutans UA159	49.841	88.858	0.443
clpC	Bacillus subtilis subsp. subtilis str. 168	46.44	91.114	0.423
clpC	Streptococcus pneumoniae Rx1	42.924	90.691	0.389
clpC	Streptococcus pneumoniae D39	42.924	90.691	0.389
clpC	Streptococcus pneumoniae TIGR4	42.768	90.691	0.388
clpC	Streptococcus mutans UA159	43.66	87.87	0.384
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	43.78	87.306	0.382
clpC	Streptococcus thermophilus LMG 18311	43.134	87.306	0.377
clpC	Streptococcus thermophilus LMD-9	42.56	88.152	0.375