Detailed information NTG0055086

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DEIPE_RS08710
• Genome accession: NC_019793
• Coordinates: 1773053..1774144 (-)
• Length: 363 a.a.
• NCBI ID: WP_015235603.1
• Uniprot ID: L0A085
• Organism: Deinococcus peraridilitoris DSM 19664
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1768053..1779144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DEIPE_RS08685 (Deipe_1774)	-	1769044..1769565 (-)	522	WP_015235598.1	isoprenylcysteine carboxyl methyltransferase family protein	-
DEIPE_RS08690 (Deipe_1775)	-	1769567..1770700 (-)	1134	WP_015235599.1	3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein	-
DEIPE_RS08695 (Deipe_1776)	-	1770825..1771691 (-)	867	WP_015235600.1	aldo/keto reductase	-
DEIPE_RS08700 (Deipe_1777)	-	1771792..1772622 (-)	831	WP_015235601.1	nitroreductase family protein	-
DEIPE_RS08705 (Deipe_1778)	-	1772619..1772924 (-)	306	WP_041230796.1	hypothetical protein	-
DEIPE_RS08710 (Deipe_1779)	dprA	1773053..1774144 (-)	1092	WP_015235603.1	DNA-processing protein DprA	Machinery gene
DEIPE_RS08715 (Deipe_1780)	-	1774186..1775154 (-)	969	WP_015235604.1	family 10 glycosylhydrolase	-
DEIPE_RS08720 (Deipe_1781)	-	1775786..1776823 (+)	1038	WP_015235605.1	hydrolase	-
DEIPE_RS25260 (Deipe_1782)	-	1776899..1777645 (-)	747	WP_015235606.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 37691.66 Da
• Isoelectric Point: 7.6895

>NTDB_id=55086 DEIPE_RS08710 WP_015235603.1 1773053..1774144(-) (dprA) [Deinococcus peraridilitoris DSM 19664]
MSLVTLLSAPPDELTALLALRFTPHLGPHRIETLRRHFGSAGAALSARKEELRQVPGLDARSVKEVGSASACERACLELQ
RARLAGVSLLGRGLEGYPAALEALTDPPAVLWVKGKLPPLGVVPRAVGIVGTRSASPFALNFTRRLTLDLARAEVMIISG
LARGIDTAAHQAAIEGGVPTVGVLGSGVDNIYPKENKELSERMTVISEHPLGTRPAAHNFPGRNRIIAALSAGSVVVEGS
ARSGALITAVAALECGRSVFAVPGRPGDPLAAGPHQLLREGAALCENAGDVLTELGWSGAPPAPPPALPPELARVYGALS
GPTLLDDLAATLGIPLSEVQTAVMMLCLQELVTECPGGRYLKR

Nucleotide

• Length: 1092 bp

>NTDB_id=55086 DEIPE_RS08710 WP_015235603.1 1773053..1774144(-) (dprA) [Deinococcus peraridilitoris DSM 19664]
ATGTCCCTCGTGACCCTCTTGAGCGCGCCGCCTGACGAGCTGACTGCCCTGCTGGCGCTGCGTTTCACGCCGCATCTGGG
CCCGCACCGCATCGAGACGCTGCGGCGCCACTTCGGTTCGGCGGGTGCGGCGCTGAGCGCCCGCAAGGAAGAGTTGCGTC
AGGTGCCCGGTCTCGACGCGCGAAGCGTCAAAGAGGTCGGTTCGGCGTCTGCCTGCGAGCGAGCCTGCCTGGAACTTCAG
CGTGCCCGGCTCGCGGGTGTTTCCCTGCTGGGTCGTGGCCTGGAAGGGTATCCGGCGGCGCTGGAAGCCCTCACCGATCC
GCCGGCCGTGCTGTGGGTCAAAGGGAAGCTGCCGCCGCTGGGCGTCGTGCCGCGTGCGGTGGGCATCGTGGGAACGCGCA
GCGCGAGCCCCTTCGCGCTGAACTTCACGCGCCGCCTGACGCTGGATCTCGCGCGCGCCGAGGTGATGATCATTTCCGGT
CTGGCGCGCGGCATTGACACGGCCGCGCATCAGGCGGCCATCGAAGGGGGCGTGCCCACGGTCGGGGTGCTGGGCAGCGG
GGTGGACAACATTTACCCGAAGGAGAACAAGGAACTTTCGGAACGGATGACCGTCATCAGCGAGCACCCGCTGGGCACCC
GGCCTGCCGCCCACAACTTTCCCGGTCGCAACCGGATCATCGCGGCCCTCAGCGCGGGTTCCGTGGTGGTGGAAGGAAGC
GCGCGCAGCGGCGCCCTGATCACCGCGGTGGCCGCCCTGGAGTGCGGACGCAGCGTCTTCGCCGTGCCCGGGCGACCGGG
TGATCCGCTGGCCGCCGGACCCCACCAGCTGCTGCGTGAAGGGGCCGCCCTGTGCGAGAACGCCGGAGACGTCCTGACCG
AATTGGGCTGGAGCGGCGCCCCGCCCGCTCCCCCGCCTGCCCTGCCCCCCGAACTGGCACGCGTGTACGGCGCCCTGAGC
GGACCGACCTTGCTCGACGATCTCGCCGCGACGCTGGGAATCCCCCTTTCCGAAGTGCAAACAGCAGTGATGATGCTGTG
CCTGCAGGAGCTGGTGACGGAGTGCCCGGGCGGGCGCTACTTGAAGCGCTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (85-285)

• DprA winged helix domain (DprA_WH) (300-358)

3D structure

• AlphaFold DB: L0A085

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.5	96.97	0.606
dprA	Neisseria gonorrhoeae strain FA1090	37.913	100	0.41
dprA	Neisseria gonorrhoeae MS11	37.659	100	0.408
dprA	Thermus thermophilus HB27	48.736	76.309	0.372