Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   ANG_RS03090 Genome accession   NZ_AP013072
Coordinates   610767..612782 (+) Length   671 a.a.
NCBI ID   WP_003035488.1    Uniprot ID   I0SFH4
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 605767..617782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS03075 (ANG_0618) - 608122..609162 (+) 1041 WP_025271654.1 3-deoxy-7-phosphoheptulonate synthase -
  ANG_RS03080 (ANG_0619) acpS 609204..609569 (+) 366 WP_025271655.1 holo-ACP synthase -
  ANG_RS03085 (ANG_0620) alr 609556..610662 (+) 1107 WP_003035546.1 alanine racemase -
  ANG_RS03090 (ANG_0621) recG/mmsA 610767..612782 (+) 2016 WP_003035488.1 ATP-dependent DNA helicase RecG Machinery gene
  ANG_RS03095 (ANG_0623) - 613103..614065 (-) 963 WP_003035568.1 asparaginase -
  ANG_RS03100 (ANG_0624) - 614130..615518 (+) 1389 WP_003035466.1 Cof-type HAD-IIB family hydrolase -
  ANG_RS03105 (ANG_0625) - 615564..616016 (-) 453 WP_003028799.1 universal stress protein -
  ANG_RS03110 (ANG_0626) - 616168..617382 (+) 1215 WP_003035582.1 pyridoxal phosphate-dependent aminotransferase -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 75693.55 Da        Isoelectric Point: 6.3973

>NTDB_id=55086 ANG_RS03090 WP_003035488.1 610767..612782(+) (recG/mmsA) [Streptococcus anginosus subsp. whileyi MAS624]
MNLHQPLTVLPGVGPKSAKKFTRLGIENLQDLLLYFPFRYEDFKSKNVLELEDGEKAVISGLVVTPANVQYYGYKRNRLR
FTIKQGEVVLAVNFFNQPYLVDKVEVGSTISIFGKWDKAKASLTGMKILAQVEDDLQPVYRVAQGISQASLVKVIKTAFD
QGLELLLEENLPQILLERYQLVERSQAVRAMHFPKDLTEYKQALRRVKFEELFYFQMQLQVLKSESKNASQGLAIPWRDD
LLEKKLTLLPFELTAAQKRSLDEILQDMQAPTHMNRLLQGDVGSGKTVVAGLAMYATYTAGFQSALMVPTEILAEQHFDS
LSQLFPELRIILLTGGMKPTERRQALEAIEAGQVDMIVGTHALIQESVTYHQLGLVIIDEQHRFGVGQRRILREKGNNPD
VLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIITRWVKHEQLEVVLDWLRKELQRGAQVYVISPLIEESEALDLKN
AIALEEELKAYFGDKAQVALLHGKMKSEEKDTIMQDFKKGKIDILVSTTVIEVGVNVPNATVMLIMDADRFGLSQLHQLR
GRVGRGDKQSYAVLVANPKTESGKKRMKIMTETTNGFVLAEEDLKMRGSGEIFGTRQSGIPEFQVADIVEDYPILEEARK
VASQIVSTPDWRTNADWHIVALHLDKQDYLD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=55086 ANG_RS03090 WP_003035488.1 610767..612782(+) (recG/mmsA) [Streptococcus anginosus subsp. whileyi MAS624]
ATGAATTTACACCAACCTTTAACGGTTCTGCCGGGTGTAGGACCGAAATCTGCTAAAAAGTTTACTAGGCTGGGAATTGA
AAACCTACAGGATTTACTACTCTATTTTCCATTTCGCTATGAAGATTTTAAAAGTAAGAATGTGTTAGAACTGGAAGATG
GTGAAAAGGCGGTTATCTCAGGACTTGTCGTTACGCCAGCTAACGTGCAGTATTATGGCTATAAACGTAATCGTCTACGT
TTTACTATAAAACAAGGCGAAGTGGTGCTTGCAGTCAATTTTTTTAACCAACCCTATCTGGTAGACAAAGTGGAGGTTGG
TTCAACCATTTCTATTTTCGGGAAATGGGATAAAGCAAAAGCGAGTCTGACAGGTATGAAAATCTTAGCACAAGTGGAGG
ATGACTTACAGCCTGTCTATCGAGTGGCACAAGGGATTAGTCAAGCTAGTTTGGTGAAAGTCATTAAGACAGCTTTTGAC
CAAGGCTTAGAACTTCTGTTGGAAGAAAATCTGCCTCAAATTCTGCTGGAGCGCTATCAGTTAGTGGAACGCAGTCAGGC
CGTACGAGCAATGCATTTTCCAAAAGACTTAACAGAATACAAACAAGCCTTGCGTCGGGTCAAGTTTGAAGAGCTTTTTT
ACTTTCAAATGCAGTTACAGGTCCTAAAGAGCGAAAGCAAGAATGCGAGTCAAGGGTTAGCTATTCCTTGGCGAGATGAT
TTATTAGAAAAAAAGCTGACACTGCTACCTTTTGAATTGACAGCTGCCCAGAAGCGGAGTCTTGATGAAATTCTACAAGA
TATGCAAGCACCAACCCACATGAACCGGCTTTTGCAAGGAGATGTCGGTAGTGGAAAGACGGTGGTTGCAGGTTTAGCCA
TGTATGCTACCTATACGGCTGGTTTTCAGTCTGCTCTTATGGTACCGACTGAAATTTTGGCAGAGCAGCATTTTGATAGC
TTGAGCCAACTTTTTCCTGAACTACGGATAATTCTGTTGACAGGAGGAATGAAGCCGACAGAACGCAGACAAGCACTAGA
AGCGATTGAGGCTGGTCAGGTAGATATGATTGTCGGTACTCATGCTTTGATTCAAGAAAGTGTGACATATCATCAGCTTG
GTCTGGTGATTATTGATGAACAGCACCGCTTTGGAGTGGGACAGAGACGAATTTTGAGGGAAAAAGGAAATAATCCTGAT
GTGCTCATGATGACTGCAACGCCCATTCCTAGGACGCTTGCTATTACTGCTTTTGGTGATATGGATGTGTCAATTATTGA
CCAAATGCCAGCTGGGCGTAAGCCGATTATCACTCGTTGGGTCAAGCATGAGCAGCTGGAAGTAGTTCTGGATTGGTTGA
GGAAAGAGCTGCAACGAGGTGCTCAGGTCTATGTCATCTCTCCTTTGATTGAGGAGTCGGAAGCTCTGGATCTGAAAAAT
GCTATTGCTTTGGAAGAGGAATTAAAGGCTTATTTCGGTGACAAAGCACAAGTAGCTCTGCTACATGGTAAAATGAAGAG
CGAAGAAAAAGATACCATTATGCAGGATTTTAAGAAAGGAAAAATTGACATTCTGGTTTCCACGACTGTTATTGAAGTCG
GTGTCAATGTCCCCAATGCTACGGTCATGCTAATCATGGATGCGGATCGATTTGGGCTCAGTCAGCTCCACCAGTTACGT
GGTCGGGTAGGACGTGGAGACAAGCAATCTTATGCGGTTCTCGTGGCTAATCCTAAGACAGAATCCGGCAAGAAACGCAT
GAAAATCATGACGGAAACGACTAACGGTTTCGTCTTGGCTGAGGAAGATTTGAAAATGCGTGGCTCTGGTGAAATCTTCG
GCACGCGTCAATCAGGGATTCCAGAGTTTCAAGTGGCGGATATTGTAGAGGATTATCCAATTTTAGAGGAGGCCAGAAAA
GTCGCCAGTCAAATTGTGTCCACTCCTGATTGGCGAACGAATGCAGATTGGCATATTGTAGCGCTTCATTTGGACAAGCA
GGACTACTTGGATTGA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(447-566)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-660)

RecG wedge domain (RecG_wedge)

(12-158)

DEAD/DEAH box helicase (DEAD)

(254-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

77.943

100

0.779
  recG/mmsA Streptococcus pneumoniae R36A

77.943

100

0.779
  recG Bacillus subtilis subsp. subtilis str. 168

47.935

100

0.484
  recG Neisseria meningitidis strain C311

38.379

97.466

0.374

Multiple sequence alignment