Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   J5M87_RS08940 Genome accession   NZ_CP072115
Coordinates   1915650..1916363 (-) Length   237 a.a.
NCBI ID   WP_154607516.1    Uniprot ID   A0A6I4RMW4
Organism   Streptococcus zhangguiae strain zg-86     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1910650..1921363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS08915 (J5M87_08915) trxA 1910873..1911187 (-) 315 WP_067087935.1 thioredoxin -
  J5M87_RS08920 (J5M87_08920) - 1911254..1911904 (-) 651 WP_154607512.1 GNAT family N-acetyltransferase -
  J5M87_RS08925 (J5M87_08925) - 1911978..1914311 (-) 2334 WP_154607513.1 endonuclease MutS2 -
  J5M87_RS08930 (J5M87_08930) - 1914725..1915273 (-) 549 WP_154607514.1 CvpA family protein -
  J5M87_RS08935 (J5M87_08935) zapA 1915270..1915581 (-) 312 WP_154607515.1 cell division protein ZapA -
  J5M87_RS08940 (J5M87_08940) treR 1915650..1916363 (-) 714 WP_154607516.1 trehalose operon repressor Regulator
  J5M87_RS08945 (J5M87_08945) treP 1916554..1918536 (+) 1983 WP_154607517.1 PTS system trehalose-specific EIIBC component -
  J5M87_RS08950 (J5M87_08950) treC 1918732..1920357 (+) 1626 WP_154607518.1 alpha,alpha-phosphotrehalase -
  J5M87_RS08955 (J5M87_08955) purR 1920526..1921338 (-) 813 WP_154607519.1 pur operon repressor -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27499.49 Da        Isoelectric Point: 7.3932

>NTDB_id=550556 J5M87_RS08940 WP_154607516.1 1915650..1916363(-) (treR) [Streptococcus zhangguiae strain zg-86]
MKKYQEIFNDIKEKITEHIYPAEHVLPTEKELQAQYQVSRDTIRKALAMLTERGLIQKVQGKGSLVLKQELLDFPVSGLT
SYQELAQSLRMENQTKVVSLELVTVTSSLAQLTGFEPYQQVWKIVRTRSIDGKVSVLDTDYLSKEFVPHLTKEIAQVSIY
AYLEGELGLDIAYAQKEITVEPTNREERELMNSKDDYLVQIRSRVFLGNTQQFQYTESKHKIDKFRFVDFARRKNAL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=550556 J5M87_RS08940 WP_154607516.1 1915650..1916363(-) (treR) [Streptococcus zhangguiae strain zg-86]
ATGAAAAAATACCAAGAAATTTTCAATGATATTAAGGAAAAAATAACAGAGCACATCTACCCTGCAGAGCATGTCTTACC
CACTGAAAAAGAGTTACAAGCTCAGTATCAGGTGAGTCGCGATACGATTCGAAAGGCCTTAGCGATGCTAACGGAGCGTG
GATTGATTCAAAAGGTACAGGGGAAGGGATCGCTGGTCTTAAAACAAGAATTGCTTGATTTTCCAGTATCAGGCCTTACC
TCCTATCAGGAATTGGCCCAGTCACTTCGTATGGAGAACCAGACAAAAGTGGTGAGTTTAGAGTTGGTGACTGTCACGAG
TAGTCTAGCGCAGTTAACAGGTTTTGAACCCTATCAACAAGTATGGAAAATTGTCCGTACAAGATCGATTGACGGTAAGG
TATCGGTTCTTGATACGGATTATCTTTCCAAGGAATTTGTTCCCCATTTGACCAAGGAAATCGCCCAAGTCTCAATCTAT
GCCTATCTTGAAGGGGAGTTGGGACTGGATATTGCCTACGCGCAAAAGGAGATTACGGTTGAGCCGACCAATCGAGAAGA
AAGGGAATTGATGAACAGTAAGGATGATTATCTGGTTCAGATTCGATCCCGCGTTTTTTTAGGAAATACTCAGCAATTTC
AATACACAGAAAGCAAGCATAAGATTGATAAGTTTCGTTTTGTGGATTTTGCTCGGAGAAAGAATGCACTTTGA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-226)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I4RMW4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

51.282

98.734

0.506