Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   J5M87_RS02600 Genome accession   NZ_CP072115
Coordinates   509835..510638 (+) Length   267 a.a.
NCBI ID   WP_154608199.1    Uniprot ID   A0A6I4RBQ9
Organism   Streptococcus zhangguiae strain zg-86     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 504835..515638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS02580 (J5M87_02580) - 505838..506470 (-) 633 WP_154608195.1 HXXEE domain-containing protein -
  J5M87_RS02585 (J5M87_02585) - 506571..507194 (+) 624 WP_154608196.1 TetR/AcrR family transcriptional regulator -
  J5M87_RS02590 (J5M87_02590) micA 507782..508486 (+) 705 WP_154608197.1 response regulator YycF Regulator
  J5M87_RS02595 (J5M87_02595) micB 508479..509828 (+) 1350 WP_154608198.1 cell wall metabolism sensor histidine kinase VicK Regulator
  J5M87_RS02600 (J5M87_02600) vicX 509835..510638 (+) 804 WP_154608199.1 MBL fold metallo-hydrolase Regulator
  J5M87_RS02605 (J5M87_02605) abc-f 511223..512632 (+) 1410 WP_154608200.1 ribosomal protection-like ABC-F family protein -
  J5M87_RS02610 (J5M87_02610) pbp2b 512717..514792 (+) 2076 WP_208769378.1 penicillin-binding protein PBP2B -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29597.42 Da        Isoelectric Point: 5.1866

>NTDB_id=550530 J5M87_RS02600 WP_154608199.1 509835..510638(+) (vicX) [Streptococcus zhangguiae strain zg-86]
MGETGFRYSILASGSSGNSFYLETEKKKILVDAGLSGKKITSLLAEIDRRPEDLDAILVTHEHSDHIHGIGVLARKYGMD
IYANEATWQAMEGKLGKIALEQKHIFELGVTKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRLAGLV
ENADGYLIESNHDVEILRAGSYSWNLKQRILSDKGHLCNEDGSDAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATPLTEI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=550530 J5M87_RS02600 WP_154608199.1 509835..510638(+) (vicX) [Streptococcus zhangguiae strain zg-86]
ATGGGAGAAACAGGATTTCGTTATAGTATTTTAGCCTCTGGTTCGAGTGGAAATTCCTTTTACTTGGAGACAGAGAAGAA
AAAGATTTTAGTGGACGCAGGTTTGTCGGGCAAGAAAATCACCAGTTTGCTGGCAGAAATTGACCGCAGACCGGAGGATT
TGGATGCCATTTTAGTTACGCATGAGCATAGCGATCATATTCACGGGATTGGCGTTCTAGCTCGTAAATATGGCATGGAC
ATTTATGCTAACGAAGCGACCTGGCAGGCCATGGAGGGAAAATTAGGTAAGATTGCCCTAGAGCAAAAGCATATTTTTGA
ATTAGGAGTGACCAAGACTTTCGGGGATTTGGATATAGAGAGTTTTGGGGTCAGCCATGATGCAGCTTGTCCACAATTTT
ACCGCTTTATGAAGGATGACAAGAGCTTTGTGATGCTAACAGATACAGGTTATGTGAGCGATCGACTAGCAGGGCTTGTT
GAAAATGCGGACGGGTACCTGATTGAGTCCAACCACGATGTGGAAATCTTGCGGGCGGGTTCTTATTCATGGAATCTCAA
GCAACGGATTTTGTCAGACAAGGGACATCTTTGTAACGAAGACGGATCAGATGCCATGATTCGTTCTCTTGGTAATCGAA
CCAAGAAGATTTACCTAGGTCATCTGAGTAAGGAAAACAATATCAAGGAACTGGCCCACATGACCATGGTCAATCAGCTT
GCCCAAGCGGATTTGGGAGTTGGAGTTGATTTTCAAGTTTACGATACATCACCAGACACCGCTACCCCCTTAACGGAGAT
ATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I4RBQ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.903

100

0.779