Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   J5M87_RS02525 Genome accession   NZ_CP072115
Coordinates   492366..493367 (+) Length   333 a.a.
NCBI ID   WP_154608259.1    Uniprot ID   -
Organism   Streptococcus zhangguiae strain zg-86     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 487366..498367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS02500 (J5M87_02500) - 487582..488211 (+) 630 WP_154608182.1 NAD(P)-dependent oxidoreductase -
  J5M87_RS02505 (J5M87_02505) - 488221..489063 (+) 843 WP_154608183.1 VOC family protein -
  J5M87_RS02510 (J5M87_02510) - 489085..489477 (+) 393 WP_154608184.1 DUF1304 domain-containing protein -
  J5M87_RS02515 (J5M87_02515) - 489485..490390 (+) 906 WP_154608185.1 alpha/beta hydrolase -
  J5M87_RS02520 (J5M87_02520) - 490912..491994 (-) 1083 WP_154608186.1 Xaa-Pro peptidase family protein -
  J5M87_RS02525 (J5M87_02525) ccpA 492366..493367 (+) 1002 WP_154608259.1 catabolite control protein A Regulator
  J5M87_RS02530 (J5M87_02530) - 493566..494564 (+) 999 WP_154608187.1 glycosyltransferase -
  J5M87_RS02535 (J5M87_02535) - 494565..495890 (+) 1326 WP_154608188.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36766.91 Da        Isoelectric Point: 5.3350

>NTDB_id=550527 J5M87_RS02525 WP_154608259.1 492366..493367(+) (ccpA) [Streptococcus zhangguiae strain zg-86]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFA
TLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYAKATKDSVELLAKNNEKIAFVSGPLVDEINGKVRFSGYKEGLKEKGLTFNEGLVFESKYKYEEGYALADRILNAG
ATAAYVAEDEIAAGLLNGIVDKGIKVPEEFEIITSDDSLVTKFTSPNLTSVSQPLYDIGAIAMRMLTKIMHKEELDTREV
ILNHGIKERKSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=550527 J5M87_RS02525 WP_154608259.1 492366..493367(+) (ccpA) [Streptococcus zhangguiae strain zg-86]
TTGAATACTGATGATACGGTAACCATTTACGATGTTGCTCGGGAAGCAGGCGTTTCCATGGCAACCGTTAGCCGAGTAGT
AAATGGCAATAAGAATGTAAAAGAGAACACACGTAAAAAAGTATTGGAAGTGATTGATCGCTTGGATTACCGACCAAATG
CCGTGGCGCGTGGGTTGGCGAGTAAGAAAACGACAACGGTTGGGGTAGTTATTCCAAATATTGCCAATGCCTATTTTGCG
ACCTTGGCAAAAGGGATTGATGATATTGCGGACATGTATAAATACAATATTGTCTTGGCAAACAGTGATGAAAATGATGA
AAAAGAAATCAACGTGGTTAATACGCTGTTTTCAAAACAGGTGGACGGCATTATTTTCATGGGCTACCATTTGACAGATA
AGATTCGTGCCGAGTTTTCTCGTTCACGGACTCCGATTGTCCTTGCAGGGACAGTTGATTTAGAACATCAGTTACCAAGT
GTCAATATTGATTATGCGAAAGCAACAAAAGATTCAGTTGAATTGTTAGCGAAAAACAATGAAAAAATTGCCTTTGTGTC
AGGTCCTCTAGTGGATGAAATCAATGGAAAAGTACGTTTCTCAGGCTACAAGGAAGGATTGAAAGAAAAAGGCCTAACCT
TTAACGAGGGTCTAGTCTTTGAATCCAAATACAAGTACGAAGAAGGCTATGCTCTTGCAGATCGTATCTTGAATGCTGGT
GCCACAGCGGCCTACGTAGCAGAAGATGAAATTGCAGCAGGCTTGCTCAATGGGATTGTCGATAAGGGAATCAAGGTACC
AGAAGAGTTTGAAATTATCACAAGTGACGACTCCTTGGTGACAAAATTCACCAGTCCAAACTTAACTTCTGTTAGCCAGC
CCTTGTATGATATCGGTGCAATTGCCATGCGGATGTTGACAAAGATTATGCATAAGGAAGAGTTGGATACACGTGAAGTG
ATTTTGAATCATGGTATTAAAGAACGCAAATCAACCAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

79.58

100

0.796
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.679

100

0.787
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.308

99.399

0.58