Detailed information NTG0549753

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J5D23_RS01620
• Genome accession: NZ_CP071987
• Coordinates: 339394..340194 (+)
• Length: 266 a.a.
• NCBI ID: WP_209614133.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5136
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 334394..345194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D23_RS01585 (J5D23_01585)	pseH	334888..335430 (+)	543	WP_209614128.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
J5D23_RS01590 (J5D23_01590)	-	335363..336301 (-)	939	WP_209614129.1	tetraacyldisaccharide 4'-kinase	-
J5D23_RS01595 (J5D23_01595)	-	336298..337080 (-)	783	WP_209614130.1	NAD+ synthase	-
J5D23_RS01605 (J5D23_01605)	ilvC	337329..338321 (+)	993	WP_209614131.1	ketol-acid reductoisomerase	-
J5D23_RS01610 (J5D23_01610)	minD	338346..339152 (+)	807	WP_209614132.1	septum site-determining protein MinD	-
J5D23_RS01615 (J5D23_01615)	minE	339149..339382 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
J5D23_RS01620 (J5D23_01620)	dprA	339394..340194 (+)	801	WP_209614133.1	DNA-processing protein DprA	Machinery gene
J5D23_RS01625 (J5D23_01625)	dprB	340191..340595 (+)	405	WP_209614134.1	Holliday junction resolvase RuvX	Machinery gene
J5D23_RS01630 (J5D23_01630)	-	340829..341500 (+)	672	WP_077367860.1	tetratricopeptide repeat protein	-
J5D23_RS01635 (J5D23_01635)	-	341615..341953 (+)	339	WP_077645211.1	hypothetical protein	-
J5D23_RS01640 (J5D23_01640)	-	341937..342497 (+)	561	WP_209614135.1	hypothetical protein	-
J5D23_RS01645 (J5D23_01645)	-	342599..343480 (-)	882	WP_209614136.1	RluA family pseudouridine synthase	-
J5D23_RS01650 (J5D23_01650)	recJ	343480..345030 (-)	1551	WP_209614137.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29893.86 Da
• Isoelectric Point: 8.5826

>NTDB_id=549753 J5D23_RS01620 WP_209614133.1 339394..340194(+) (dprA) [Helicobacter pylori strain MT5136]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGTVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=549753 J5D23_RS01620 WP_209614133.1 339394..340194(+) (dprA) [Helicobacter pylori strain MT5136]
ATGAAAAGCCACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCACGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATTTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCTTAAACGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414