Detailed information NTG0549734

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J5D25_RS01660
• Genome accession: NZ_CP071986
• Coordinates: 346510..347310 (+)
• Length: 266 a.a.
• NCBI ID: WP_209554052.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5124
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 341510..352310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D25_RS01625 (J5D25_01625)	pseH	342007..342549 (+)	543	WP_209554048.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
J5D25_RS01630 (J5D25_01630)	-	342482..343420 (-)	939	WP_209554049.1	tetraacyldisaccharide 4'-kinase	-
J5D25_RS01635 (J5D25_01635)	-	343417..344199 (-)	783	WP_097701273.1	NAD+ synthase	-
J5D25_RS01645 (J5D25_01645)	ilvC	344451..345443 (+)	993	WP_209554050.1	ketol-acid reductoisomerase	-
J5D25_RS01650 (J5D25_01650)	minD	345467..346273 (+)	807	WP_209554051.1	septum site-determining protein MinD	-
J5D25_RS01655 (J5D25_01655)	minE	346270..346503 (+)	234	WP_077386752.1	cell division topological specificity factor MinE	-
J5D25_RS01660 (J5D25_01660)	dprA	346510..347310 (+)	801	WP_209554052.1	DNA-processing protein DprA	Machinery gene
J5D25_RS01665 (J5D25_01665)	dprB	347307..347750 (+)	444	WP_209554053.1	Holliday junction resolvase RuvX	Machinery gene
J5D25_RS01670 (J5D25_01670)	-	347942..348301 (+)	360	WP_209554054.1	tetratricopeptide repeat protein	-
J5D25_RS01675 (J5D25_01675)	-	348488..348826 (+)	339	WP_000699891.1	hypothetical protein	-
J5D25_RS01680 (J5D25_01680)	-	348810..349370 (+)	561	WP_156534390.1	hypothetical protein	-
J5D25_RS01685 (J5D25_01685)	-	349503..350384 (-)	882	WP_209554055.1	RluA family pseudouridine synthase	-
J5D25_RS01690 (J5D25_01690)	recJ	350384..351934 (-)	1551	WP_209554056.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29869.73 Da
• Isoelectric Point: 7.8669

>NTDB_id=549734 J5D25_RS01660 WP_209554052.1 346510..347310(+) (dprA) [Helicobacter pylori strain MT5124]
MKSNFQYSTLENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=549734 J5D25_RS01660 WP_209554052.1 346510..347310(+) (dprA) [Helicobacter pylori strain MT5124]
ATGAAAAGTAATTTCCAATACAGCACGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATTTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCTTGAATGAGAGCGACGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTTTGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCACATTGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	98.12	100	0.981
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398