Detailed information NTG0549673

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J5D21_RS01640
• Genome accession: NZ_CP071982
• Coordinates: 342888..343688 (+)
• Length: 266 a.a.
• NCBI ID: WP_077645213.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5135
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 337888..348688

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D21_RS01605 (J5D21_01605)	pseH	338381..338923 (+)	543	WP_209612075.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
J5D21_RS01610 (J5D21_01610)	-	338856..339794 (-)	939	WP_209612077.1	tetraacyldisaccharide 4'-kinase	-
J5D21_RS01615 (J5D21_01615)	-	339791..340573 (-)	783	WP_209612079.1	NAD+ synthase	-
J5D21_RS01625 (J5D21_01625)	ilvC	340823..341815 (+)	993	WP_209612081.1	ketol-acid reductoisomerase	-
J5D21_RS01630 (J5D21_01630)	minD	341840..342646 (+)	807	WP_077645214.1	septum site-determining protein MinD	-
J5D21_RS01635 (J5D21_01635)	minE	342643..342876 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
J5D21_RS01640 (J5D21_01640)	dprA	342888..343688 (+)	801	WP_077645213.1	DNA-processing protein DprA	Machinery gene
J5D21_RS01645 (J5D21_01645)	dprB	343685..344089 (+)	405	WP_077645212.1	Holliday junction resolvase RuvX	Machinery gene
J5D21_RS01650 (J5D21_01650)	-	344191..344982 (+)	792	WP_209612083.1	tetratricopeptide repeat protein	-
J5D21_RS01655 (J5D21_01655)	-	345169..345507 (+)	339	WP_000699891.1	hypothetical protein	-
J5D21_RS01660 (J5D21_01660)	-	345491..346051 (+)	561	WP_209612085.1	hypothetical protein	-
J5D21_RS01665 (J5D21_01665)	-	346197..347078 (-)	882	WP_209612087.1	RluA family pseudouridine synthase	-
J5D21_RS01670 (J5D21_01670)	recJ	347078..348628 (-)	1551	WP_209612089.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29847.83 Da
• Isoelectric Point: 8.5952

>NTDB_id=549673 J5D21_RS01640 WP_077645213.1 342888..343688(+) (dprA) [Helicobacter pylori strain MT5135]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGTVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=549673 J5D21_RS01640 WP_077645213.1 342888..343688(+) (dprA) [Helicobacter pylori strain MT5135]
ATGAAAAGCCACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCACGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATTTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCCTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGTGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATCCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGTATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414