Detailed information NTG0549607

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J5D22_RS01625
• Genome accession: NZ_CP071977
• Coordinates: 343591..344391 (+)
• Length: 266 a.a.
• NCBI ID: WP_209506167.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5105
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 338591..349391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D22_RS01590 (J5D22_01590)	pseH	339091..339633 (+)	543	WP_209506160.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
J5D22_RS01595 (J5D22_01595)	-	339566..340504 (-)	939	WP_209506162.1	tetraacyldisaccharide 4'-kinase	-
J5D22_RS01600 (J5D22_01600)	-	340501..341283 (-)	783	WP_209506164.1	NAD+ synthase	-
J5D22_RS01610 (J5D22_01610)	ilvC	341532..342524 (+)	993	WP_209506165.1	ketol-acid reductoisomerase	-
J5D22_RS01615 (J5D22_01615)	minD	342548..343354 (+)	807	WP_120906098.1	septum site-determining protein MinD	-
J5D22_RS01620 (J5D22_01620)	minE	343351..343584 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
J5D22_RS01625 (J5D22_01625)	dprA	343591..344391 (+)	801	WP_209506167.1	DNA-processing protein DprA	Machinery gene
J5D22_RS01630 (J5D22_01630)	dprB	344388..344792 (+)	405	WP_209506169.1	Holliday junction resolvase RuvX	Machinery gene
J5D22_RS01635 (J5D22_01635)	-	344893..345252 (+)	360	WP_209506171.1	tetratricopeptide repeat protein	-
J5D22_RS01640 (J5D22_01640)	-	345439..345777 (+)	339	WP_000699880.1	hypothetical protein	-
J5D22_RS01645 (J5D22_01645)	-	345761..346321 (+)	561	WP_021172490.1	hypothetical protein	-
J5D22_RS01650 (J5D22_01650)	-	346490..347371 (-)	882	WP_077645210.1	RluA family pseudouridine synthase	-
J5D22_RS01655 (J5D22_01655)	recJ	347371..348921 (-)	1551	WP_209506173.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29824.77 Da
• Isoelectric Point: 8.2191

>NTDB_id=549607 J5D22_RS01625 WP_209506167.1 343591..344391(+) (dprA) [Helicobacter pylori strain MT5105]
MKSNFQYGALENIPKAFDILKDPPKKLYCVGDTKLLDMPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=549607 J5D22_RS01625 WP_209506167.1 343591..344391(+) (dprA) [Helicobacter pylori strain MT5105]
ATGAAAAGTAATTTCCAATACGGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTGGACATGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTGGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATTTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCCTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCTTGAATGAGAGCGACGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398