Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   J4048_RS15680 Genome accession   NZ_CP071970
Coordinates   3195353..3197659 (-) Length   768 a.a.
NCBI ID   WP_208557092.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain XJ5     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3190353..3202659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4048_RS15640 (J4048_15640) - 3190813..3191244 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  J4048_RS15645 (J4048_15645) - 3191244..3191585 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  J4048_RS15650 (J4048_15650) - 3191578..3193059 (+) 1482 WP_007408671.1 Na+/H+ antiporter subunit D -
  J4048_RS15655 (J4048_15655) - 3193065..3193541 (+) 477 WP_071392239.1 Na+/H+ antiporter subunit E -
  J4048_RS15660 (J4048_15660) - 3193541..3193825 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  J4048_RS15665 (J4048_15665) mnhG 3193809..3194183 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  J4048_RS15670 (J4048_15670) - 3194223..3194606 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  J4048_RS15675 (J4048_15675) comA 3194628..3195272 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  J4048_RS15680 (J4048_15680) comP 3195353..3197659 (-) 2307 WP_208557092.1 histidine kinase Regulator
  J4048_RS15685 (J4048_15685) comX 3197682..3197852 (-) 171 WP_015418105.1 competence pheromone ComX -
  J4048_RS15690 (J4048_15690) - 3197849..3198778 (-) 930 WP_224462816.1 polyprenyl synthetase family protein -
  J4048_RS15695 (J4048_15695) degQ 3198909..3199049 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  J4048_RS15700 (J4048_15700) - 3199512..3199853 (+) 342 WP_015418107.1 hypothetical protein -
  J4048_RS15705 (J4048_15705) - 3199860..3201083 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89192.86 Da        Isoelectric Point: 8.4316

>NTDB_id=549515 J4048_RS15680 WP_208557092.1 3195353..3197659(-) (comP) [Bacillus amyloliquefaciens strain XJ5]
MKKFLKFFSVALLLFSIFYFTLVVYYTQNGIIIGTNVVKVSNQELKVVDMTRSSYGRLMGLEIGDKIVEINGHKPNKENI
YGSYLAKVRQLKVERNDKLIKLDNFEFIYLDSPYSFFSYIVPGIFYLLSLICIFYIFRVNLKKDSISAYILICFLLCISI
AYLSAGGVTRGYSVNRYINLYTFLAVPVLYLNFLHQYFKELNVKFSRGIYILILYNLPLVNIICELFEKHIKYDVITSLN
LLTFLFEMMVVYVCLILYQIKHRKKDFAYLLKVLLVSNTIAFLPFTLLYIVPLVIFGQYVYSAVITAPFLLLIPLALVYQ
FVVNKIYNIDFLLGRLRYYCLLAVIPSIGIVWVFVVFMNKNRDFNTFQITLFVFLIMLSVFYFKEVLDYKFRLKSFSEKY
NYQDSIFKYTQLIKSVSVLNQVFTHLKATILDVLPVSKAYIFEISSGGEIVYFDKQSTEPNWYPYKDKFEKVNSEIGKII
EINQGFLMKIGERGTSSYVLLCLSSINTPRLTMDETSWLKTLSFYTSVSMENVLQIEELMDHLQNLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=549515 J4048_RS15680 WP_208557092.1 3195353..3197659(-) (comP) [Bacillus amyloliquefaciens strain XJ5]
TTGAAGAAGTTTTTAAAGTTTTTTTCGGTTGCCTTATTATTGTTTAGTATTTTCTATTTTACTTTAGTAGTTTATTATAC
TCAAAATGGAATAATTATAGGTACCAATGTAGTTAAAGTTTCTAATCAAGAACTGAAAGTTGTTGATATGACAAGATCCT
CCTATGGAAGATTAATGGGGTTGGAAATTGGAGACAAAATTGTTGAAATAAATGGACATAAACCAAATAAAGAAAACATT
TATGGCTCTTACTTAGCTAAAGTTAGACAATTAAAAGTTGAACGTAATGATAAATTAATTAAGTTAGATAACTTTGAATT
TATCTATTTAGATAGCCCGTACAGTTTCTTTTCATATATTGTACCAGGTATTTTTTATTTACTGAGTTTAATATGTATTT
TTTACATCTTTAGAGTTAATTTGAAGAAAGACAGCATATCAGCATATATTCTGATTTGTTTTTTGCTATGTATATCTATT
GCTTATTTAAGTGCCGGAGGAGTGACAAGGGGATACTCTGTAAATCGTTATATTAATCTTTATACATTTTTAGCAGTGCC
TGTTTTGTATCTTAACTTCCTTCATCAATATTTTAAAGAATTAAACGTGAAATTTTCACGAGGGATTTATATTTTAATTT
TGTATAATTTACCTTTAGTGAACATCATATGTGAACTATTTGAAAAGCATATAAAGTATGATGTGATTACAAGCCTTAAT
CTCTTAACTTTTTTATTTGAAATGATGGTGGTTTATGTATGTCTTATACTTTATCAAATTAAGCATAGAAAGAAAGATTT
TGCTTATTTGTTAAAAGTATTATTAGTATCTAATACCATTGCATTCTTACCTTTTACTTTATTATATATTGTTCCTCTTG
TGATCTTTGGACAATATGTTTATAGTGCGGTAATCACTGCACCTTTTCTTTTGCTTATACCGTTAGCACTGGTATATCAA
TTTGTTGTTAATAAAATTTATAATATTGATTTTTTGTTGGGACGCTTGAGGTATTATTGTTTGTTGGCGGTTATCCCATC
AATTGGTATCGTTTGGGTTTTCGTTGTGTTTATGAATAAAAATAGAGATTTTAATACTTTTCAAATCACCTTGTTTGTTT
TTCTGATTATGCTTTCTGTTTTTTATTTTAAAGAAGTGCTGGACTATAAGTTCCGCTTAAAGAGTTTCTCAGAAAAGTAT
AATTATCAAGACAGTATTTTTAAATACACACAATTGATTAAAAGTGTGTCAGTCTTGAACCAAGTTTTCACACATCTTAA
AGCGACAATTTTAGATGTTTTGCCAGTAAGCAAAGCTTATATTTTTGAAATTAGTTCTGGCGGAGAAATTGTGTATTTTG
ACAAACAAAGTACAGAACCAAATTGGTATCCCTATAAAGACAAATTTGAAAAGGTCAATTCGGAAATCGGCAAAATCATT
GAGATTAATCAAGGGTTCCTCATGAAAATTGGCGAGAGAGGAACAAGTTCTTATGTTTTGCTTTGTTTATCAAGCATAAA
TACACCAAGACTTACAATGGATGAGACTTCATGGCTGAAGACGTTATCATTTTATACCAGTGTATCGATGGAAAATGTTC
TGCAAATTGAGGAACTTATGGATCACCTCCAAAATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTTATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.922

100

0.602