Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | BEST7003_RS00135 | Genome accession | NZ_AP012496 |
| Coordinates | 28866..29462 (+) | Length | 198 a.a. |
| NCBI ID | WP_003225425.1 | Uniprot ID | G4NT17 |
| Organism | Bacillus subtilis BEST7003 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 23866..34462
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEST7003_RS00110 (BEST7003_0016) | sleL | 23867..25150 (-) | 1284 | WP_003247133.1 | glycoside hydrolase family 18 protein | - |
| BEST7003_RS00115 (BEST7003_0017) | yaaI | 25220..25765 (-) | 546 | WP_003247139.1 | isochorismatase family cysteine hydrolase | - |
| BEST7003_RS00120 (BEST7003_0018) | tadA | 25851..26336 (+) | 486 | WP_003247140.1 | tRNA adenosine(34) deaminase TadA | - |
| BEST7003_RS00125 (BEST7003_0019) | dnaX | 26813..28504 (+) | 1692 | WP_003247135.1 | DNA polymerase III subunit gamma/tau | - |
| BEST7003_RS00130 (BEST7003_0020) | ebfC | 28528..28851 (+) | 324 | WP_003225427.1 | YbaB/EbfC family nucleoid-associated protein | - |
| BEST7003_RS00135 (BEST7003_0021) | recR | 28866..29462 (+) | 597 | WP_003225425.1 | recombination protein RecR | Machinery gene |
| BEST7003_RS00140 (BEST7003_0022) | yaaL | 29480..29704 (+) | 225 | WP_003242387.1 | YaaL family protein | - |
| BEST7003_RS00145 (BEST7003_0023) | bofA | 29771..30034 (+) | 264 | WP_003225421.1 | sigma-K factor-processing regulator BofA | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21974.53 Da Isoelectric Point: 5.3504
>NTDB_id=54900 BEST7003_RS00135 WP_003225425.1 28866..29462(+) (recR) [Bacillus subtilis BEST7003]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=54900 BEST7003_RS00135 WP_003225425.1 28866..29462(+) (recR) [Bacillus subtilis BEST7003]
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAAGACGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATCGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGTGAATTGTAA
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAAGACGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATCGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGTGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| recR | Streptococcus pneumoniae R6 |
62.121 |
100 |
0.621 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.041 |
98.99 |
0.515 |