Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | OSCIL6304_RS03815 | Genome accession | NC_019693 |
| Coordinates | 956900..957271 (+) | Length | 123 a.a. |
| NCBI ID | WP_015147160.1 | Uniprot ID | K9TD95 |
| Organism | Oscillatoria acuminata PCC 6304 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 951900..962271
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OSCIL6304_RS03795 (Oscil6304_0769) | - | 952115..953722 (+) | 1608 | WP_015147156.1 | 2-isopropylmalate synthase | - |
| OSCIL6304_RS03800 (Oscil6304_0770) | - | 953916..954446 (-) | 531 | WP_198017877.1 | Uma2 family endonuclease | - |
| OSCIL6304_RS03805 (Oscil6304_0771) | - | 954674..955552 (-) | 879 | WP_015147158.1 | M28 family peptidase | - |
| OSCIL6304_RS03810 (Oscil6304_0772) | - | 955628..956281 (-) | 654 | WP_044194438.1 | response regulator transcription factor | - |
| OSCIL6304_RS35105 | - | 956354..956545 (-) | 192 | WP_198017802.1 | hypothetical protein | - |
| OSCIL6304_RS03815 (Oscil6304_0773) | pilH | 956900..957271 (+) | 372 | WP_015147160.1 | response regulator | Machinery gene |
| OSCIL6304_RS03820 (Oscil6304_0774) | - | 957373..957858 (-) | 486 | WP_015147161.1 | DUF2721 domain-containing protein | - |
| OSCIL6304_RS03825 (Oscil6304_0775) | - | 957905..958654 (-) | 750 | WP_015147162.1 | sirohydrochlorin chelatase | - |
| OSCIL6304_RS03830 (Oscil6304_0776) | - | 958867..959226 (-) | 360 | WP_015147163.1 | rhodanese-like domain-containing protein | - |
| OSCIL6304_RS03835 (Oscil6304_0777) | - | 959375..960961 (-) | 1587 | WP_015147164.1 | serine/threonine-protein kinase | - |
| OSCIL6304_RS03840 (Oscil6304_0778) | - | 961055..961423 (-) | 369 | WP_015147165.1 | DUF4359 domain-containing protein | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13744.96 Da Isoelectric Point: 6.4569
>NTDB_id=54773 OSCIL6304_RS03815 WP_015147160.1 956900..957271(+) (pilH) [Oscillatoria acuminata PCC 6304]
MSTVLIVDDSATAREMLSSILQNVGMKVIEARDGVEAQQKISDNPPDIVVLDIIMPRMNGYDLCRWLKKTPNGHNIPVLM
CSSKAEQFDRYWGIKQGADAYLAKPFHPSELIETVKSLLRSLA
MSTVLIVDDSATAREMLSSILQNVGMKVIEARDGVEAQQKISDNPPDIVVLDIIMPRMNGYDLCRWLKKTPNGHNIPVLM
CSSKAEQFDRYWGIKQGADAYLAKPFHPSELIETVKSLLRSLA
Nucleotide
Download Length: 372 bp
>NTDB_id=54773 OSCIL6304_RS03815 WP_015147160.1 956900..957271(+) (pilH) [Oscillatoria acuminata PCC 6304]
ATGAGTACGGTATTGATTGTGGACGATAGTGCTACAGCGCGGGAAATGCTCTCCTCTATCCTCCAAAATGTAGGAATGAA
GGTCATTGAAGCCCGGGATGGGGTCGAGGCTCAACAAAAAATTTCCGATAATCCTCCGGATATCGTGGTACTAGATATTA
TTATGCCTCGTATGAATGGGTATGATTTATGCCGGTGGCTGAAAAAAACTCCCAATGGTCACAATATTCCGGTGTTGATG
TGTTCGAGCAAAGCGGAACAGTTTGACCGCTATTGGGGAATTAAGCAAGGCGCAGATGCTTATTTGGCCAAGCCTTTTCA
TCCATCTGAGTTGATTGAAACGGTGAAAAGTTTACTCCGTTCTCTGGCTTAA
ATGAGTACGGTATTGATTGTGGACGATAGTGCTACAGCGCGGGAAATGCTCTCCTCTATCCTCCAAAATGTAGGAATGAA
GGTCATTGAAGCCCGGGATGGGGTCGAGGCTCAACAAAAAATTTCCGATAATCCTCCGGATATCGTGGTACTAGATATTA
TTATGCCTCGTATGAATGGGTATGATTTATGCCGGTGGCTGAAAAAAACTCCCAATGGTCACAATATTCCGGTGTTGATG
TGTTCGAGCAAAGCGGAACAGTTTGACCGCTATTGGGGAATTAAGCAAGGCGCAGATGCTTATTTGGCCAAGCCTTTTCA
TCCATCTGAGTTGATTGAAACGGTGAAAAGTTTACTCCGTTCTCTGGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
58.678 |
98.374 |
0.577 |
| pilG | Acinetobacter baumannii strain A118 |
44.915 |
95.935 |
0.431 |
| pilL-C | Synechocystis sp. PCC 6803 |
39.831 |
95.935 |
0.382 |