Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   J4G45_RS09380 Genome accession   NZ_CP071770
Coordinates   1743508..1744212 (+) Length   234 a.a.
NCBI ID   WP_096901059.1    Uniprot ID   A0A2A5PJQ2
Organism   Acinetobacter towneri strain GX5     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1738508..1749212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4G45_RS09365 (J4G45_09370) - 1738534..1739817 (-) 1284 WP_179995349.1 DUF945 family protein -
  J4G45_RS09370 (J4G45_09375) clpB 1740046..1742625 (-) 2580 WP_004971561.1 ATP-dependent chaperone ClpB -
  J4G45_RS09375 (J4G45_09380) - 1742937..1743359 (-) 423 WP_004971563.1 OsmC family protein -
  J4G45_RS09380 (J4G45_09385) crp 1743508..1744212 (+) 705 WP_096901059.1 cAMP-activated global transcriptional regulator CRP Regulator
  J4G45_RS09385 (J4G45_09390) - 1744417..1745466 (+) 1050 WP_131261355.1 NADP(H)-dependent aldo-keto reductase -
  J4G45_RS09390 (J4G45_09395) - 1745636..1746418 (-) 783 WP_004971571.1 M48 family metallopeptidase -
  J4G45_RS09395 (J4G45_09400) - 1746575..1746883 (-) 309 WP_004971573.1 hypothetical protein -
  J4G45_RS09400 (J4G45_09405) - 1747122..1748441 (-) 1320 WP_004971574.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 26317.90 Da        Isoelectric Point: 4.7168

>NTDB_id=547635 J4G45_RS09380 WP_096901059.1 1743508..1744212(+) (crp) [Acinetobacter towneri strain GX5]
MTSNFSQLSTDALSPGQLPDSVKALLKRAYINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDDREIVVAYLNPGDF
FGEMGLFESNPQRTAEVRTRDVCEIAEITYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEQNEATDGNFDDE

Nucleotide


Download         Length: 705 bp        

>NTDB_id=547635 J4G45_RS09380 WP_096901059.1 1743508..1744212(+) (crp) [Acinetobacter towneri strain GX5]
ATGACTTCAAACTTTTCACAGCTGAGCACTGATGCATTGTCCCCTGGACAACTGCCTGACTCAGTCAAAGCATTATTAAA
ACGTGCATACATCAACCGTTATCCAAAACGGACAACTATTGTTGATGCGGGGACTGAATCTAAATCGTTATATTTGATTT
TAAAAGGTTCAGTATCAATTATTCTTCGCGAAGATGATGATCGCGAAATTGTTGTGGCATATTTGAATCCAGGCGACTTT
TTTGGGGAAATGGGTCTGTTTGAATCGAATCCACAACGTACTGCAGAAGTTCGTACTCGTGATGTCTGTGAAATTGCAGA
AATTACTTATGAAAACTTCCACGAACTCAGCAAACAATATCCTGACTTAAGCTATGCCGTTTTTGCACAGCTGGTACGTC
GTTTAAAAAATACTACACGTAAGGTAACTGACCTTGCCTTTATAGATGTGTCTGGTCGTATTGCACGTTGCTTGATTGAT
CTTTCTGCGCAACCAGAAGCCATGATTTTGCCAAACGGTCGTCAAATTCGTATTACACGCCAAGAAATTGGTCGTATTGT
CGGCTGTTCACGTGAAATGGTCGGGCGTGTTCTAAAAACACTTGAAGAACAAGGCATGATTGAAACTGATGGTAAAGCCA
TTCTGATTTTTGATGCTTCTTTGGAGCAAAATGAAGCCACTGATGGCAACTTTGATGACGAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, crp family (Crp)

(176-207)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A5PJQ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.88

100

0.919
  crp Vibrio cholerae strain A1552

47.317

87.607

0.415
  crp Haemophilus influenzae Rd KW20

47.692

83.333

0.397