Detailed information NTG0547550

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: OMLMMPMB_RS14580
• Genome accession: NZ_CP071763
• Coordinates: 3028045..3029163 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain Cl415
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3023045..3034163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OMLMMPMB_RS14570 (OMLMMPMB_02941)	-	3026161..3026853 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
OMLMMPMB_RS14575 (OMLMMPMB_02942)	pilT	3026980..3028017 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
OMLMMPMB_RS14580 (OMLMMPMB_02943)	pilU	3028045..3029163 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
OMLMMPMB_RS14585 (OMLMMPMB_02944)	fur	3029233..3029670 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
OMLMMPMB_RS14590 (OMLMMPMB_02945)	-	3029782..3030180 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
OMLMMPMB_RS14595 (OMLMMPMB_02946)	-	3030235..3030558 (-)	324	WP_000442587.1	RnfH family protein	-
OMLMMPMB_RS14600 (OMLMMPMB_02947)	-	3030558..3031625 (-)	1068	WP_002019572.1	hypothetical protein	-
OMLMMPMB_RS14605 (OMLMMPMB_02948)	-	3031778..3032233 (-)	456	WP_000782976.1	bacteriohemerythrin	-
OMLMMPMB_RS14610 (OMLMMPMB_02949)	-	3032486..3033334 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=547550 OMLMMPMB_RS14580 WP_000347039.1 3028045..3029163(+) (pilU) [Acinetobacter baumannii strain Cl415]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=547550 OMLMMPMB_RS14580 WP_000347039.1 3028045..3029163(+) (pilU) [Acinetobacter baumannii strain Cl415]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395