Detailed information NTG0546983

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LOK81_RS09320
• Genome accession: NZ_CP087992
• Coordinates: 2028508..2029653 (+)
• Length: 381 a.a.
• NCBI ID: WP_004086451.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain CFBP8433
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2023508..2034653

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOK81_RS09300 (LOK81_09225)	rsmB	2024297..2025586 (-)	1290	WP_004086443.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
LOK81_RS09305 (LOK81_09230)	fmt	2025583..2026506 (-)	924	WP_004086445.1	methionyl-tRNA formyltransferase	-
LOK81_RS09310 (LOK81_09235)	def	2026612..2027124 (-)	513	WP_004086447.1	peptide deformylase	-
LOK81_RS09315 (LOK81_09240)	-	2027263..2028417 (+)	1155	WP_004086450.1	LysM peptidoglycan-binding domain-containing protein	-
LOK81_RS09320 (LOK81_09245)	dprA	2028508..2029653 (+)	1146	WP_004086451.1	DNA-processing protein DprA	Machinery gene
LOK81_RS09325 (LOK81_09250)	-	2029699..2030172 (+)	474	WP_004089636.1	DUF494 family protein	-
LOK81_RS09330 (LOK81_09255)	-	2031144..2033591 (+)	2448	WP_004086454.1	DNA topoisomerase I	-
LOK81_RS09335 (LOK81_09260)	-	2033705..2034268 (+)	564	WP_021358455.1	Sua5/YciO/YrdC/YwlC family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40325.16 Da
• Isoelectric Point: 8.7008

>NTDB_id=546983 LOK81_RS09320 WP_004086451.1 2028508..2029653(+) (dprA) [Xylella fastidiosa subsp. multiplex strain CFBP8433]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTDGAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGAR
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPLLS
TPNSKDPKYHTLWQALAHDPMSMDSLIGRTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=546983 LOK81_RS09320 WP_004086451.1 2028508..2029653(+) (dprA) [Xylella fastidiosa subsp. multiplex strain CFBP8433]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACGCCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGCGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGGAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCCGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGCATCATCAGCGGAATGGCAGCCGGAATCGACGCC
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCAGATGTGCCATACCC
AGCACGTCACAAAAAACTGCACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCTGCCCACTTTCCACAACGCAACAGGATTATTGCAGGCTTGGCGCTGGGCACACTGGTGGTCGAAGCTGGAGCGCGT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGGCGTGCTGTATTCGCAGTGCCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACACTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACGCTAGCAGCGCCGTTAGCACACACCTTGCGTGAGCGCCTTGATGCTCCCAGTTGGCCTGTAGCGCCATTATTAAGC
ACACCAAACAGTAAAGACCCTAAATACCACACACTTTGGCAGGCCCTTGCACATGACCCAATGTCCATGGACTCATTGAT
TGGCCGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACCTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (321-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	41.176	89.239	0.367
dprA	Vibrio cholerae strain A1552	41.176	89.239	0.367
dprA	Acinetobacter baumannii D1279779	37.602	96.325	0.362