Detailed information NTG0546898

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: LP473_RS07865
• Genome accession: NZ_CP087699
• Coordinates: 1614441..1615439 (-)
• Length: 332 a.a.
• NCBI ID: WP_003129447.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain IBB417
• Function: repress the expression of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1609441..1620439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP473_RS07845 (LP473_07845)	trxA	1609833..1610147 (-)	315	WP_003129442.1	thioredoxin	-
LP473_RS07850 (LP473_07850)	mutS/mutS2	1610244..1612574 (-)	2331	WP_252174679.1	endonuclease MutS2	Machinery gene
LP473_RS07855 (LP473_07855)	-	1612619..1613179 (-)	561	WP_003129445.1	CvpA family protein	-
LP473_RS07860 (LP473_07860)	-	1613338..1614303 (-)	966	WP_003129446.1	NAD(P)/FAD-dependent oxidoreductase	-
LP473_RS07865 (LP473_07865)	ccpA	1614441..1615439 (-)	999	WP_003129447.1	catabolite control protein A	Regulator
LP473_RS07870 (LP473_07870)	-	1615654..1616742 (+)	1089	WP_003129448.1	Xaa-Pro peptidase family protein	-
LP473_RS07875 (LP473_07875)	-	1616872..1618878 (-)	2007	WP_252174680.1	cell division site-positioning protein MapZ family protein	-
LP473_RS07880 (LP473_07880)	-	1619026..1620180 (-)	1155	WP_003129451.1	class I SAM-dependent RNA methyltransferase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36602.71 Da
• Isoelectric Point: 4.9196

>NTDB_id=546898 LP473_RS07865 WP_003129447.1 1614441..1615439(-) (ccpA) [Lactococcus lactis subsp. lactis strain IBB417]
MVESTTTIYDVARVAGVSMATVSRVVNGNANVKEKTRQKVLEAIAELDYRPNAVARGLASKRTTTVGVILPTITSTYFAA
ITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSLKNSRTPVVLVGTIDGDKEIPSV
NIDYHLAAYQSTKKLIDSGNKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEGNYSYEQGKALAERLLERGA
TSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGANSPITQYTYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLV
LDHEIFSRRSTK

Nucleotide

• Length: 999 bp

>NTDB_id=546898 LP473_RS07865 WP_003129447.1 1614441..1615439(-) (ccpA) [Lactococcus lactis subsp. lactis strain IBB417]
ATGGTAGAATCAACAACAACAATTTATGATGTGGCACGTGTCGCCGGAGTGTCAATGGCAACCGTTAGTCGTGTTGTAAA
TGGAAATGCAAATGTAAAGGAAAAGACGCGCCAGAAGGTCTTAGAAGCTATTGCTGAGCTTGACTATCGTCCTAATGCAG
TTGCGCGCGGACTCGCAAGTAAACGTACAACAACAGTTGGTGTTATCTTGCCAACCATCACTTCAACTTACTTCGCAGCG
ATTACTCGCGGGGTTGATGATATCGCTTCCATGTATAAATACAACATGATTTTAGCTAATAGTGATAATGATGTTGAAAA
AGAAGAAAAAGTTTTAGAAACTTTCTTATCAAAACAAGTTGACGGAATCGTCTATATGGGTTCATCTTTAGATGAAAAAA
TTAGAACTTCCCTCAAAAATTCAAGAACACCTGTCGTTTTAGTTGGAACAATCGATGGAGATAAAGAAATTCCATCTGTT
AATATTGATTACCATTTGGCTGCTTATCAATCAACTAAAAAATTGATTGATAGCGGAAATAAAAAAATCGCTTATATCAT
GGGTTCATTGAAAGACGTTGAAAATACAGAACGCATGGTTGGTTATCAAGAAGCTTTGCTTGAAGCAAATATTGAATTTG
ATGAAAACCTCGTTTTTGAAGGTAATTATAGCTATGAACAAGGAAAAGCACTTGCTGAACGTTTACTTGAGCGAGGAGCA
ACTTCTGCAGTAGTATCACATGATACAGTAGCCGTTGGACTCTTGTCTGCAATGATGGATAAAGGAGTGAAAGTTCCTGA
AGATTTCGAAATTATCTCAGGTGCAAATTCACCAATTACTCAATATACATATCCAACTTTAACTTCTGTTAACCAACCCC
TTTACGATTTGGGAGCAGTAGCAATGCGTCTTTTGACAAAATTAATGCTTAAAGAAGATGTTGAACAAAATCAATTAGTT
TTGGATCATGAAATCTTTTCTCGTCGTTCTACCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

• Periplasmic binding protein-like domain (Peripla_BP_3) (173-331)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	100	100	1
ccpA	Streptococcus pneumoniae D39	57.402	99.699	0.572
ccpA	Streptococcus gordonii str. Challis substr. CH1	57.1	99.699	0.569