Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   LOZ89_RS01145 Genome accession   NZ_CP087594
Coordinates   246654..247289 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain SHOU-Ab01     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 241654..252289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOZ89_RS01130 (LOZ89_01130) - 242442..243626 (+) 1185 WP_000939107.1 S41 family peptidase -
  LOZ89_RS01135 (LOZ89_01135) - 243630..245051 (-) 1422 WP_005129880.1 sigma-54-dependent transcriptional regulator -
  LOZ89_RS01140 (LOZ89_01140) pilS 245075..246643 (-) 1569 WP_005129877.1 sensor histidine kinase Regulator
  LOZ89_RS01145 (LOZ89_01145) letA 246654..247289 (-) 636 WP_000633799.1 response regulator Regulator
  LOZ89_RS01150 (LOZ89_01150) pbpG 247502..248548 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  LOZ89_RS01155 (LOZ89_01155) thrC 248654..249793 (-) 1140 WP_000063593.1 threonine synthase -
  LOZ89_RS01160 (LOZ89_01160) - 249849..251150 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  LOZ89_RS01165 (LOZ89_01165) - 251395..252210 (-) 816 WP_000011163.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=546397 LOZ89_RS01145 WP_000633799.1 246654..247289(-) (letA) [Acinetobacter baumannii strain SHOU-Ab01]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=546397 LOZ89_RS01145 WP_000633799.1 246654..247289(-) (letA) [Acinetobacter baumannii strain SHOU-Ab01]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55