Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | J3Q17_RS05415 | Genome accession | NZ_CP071576 |
| Coordinates | 1054910..1055212 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain R12 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1049910..1060212
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3Q17_RS05390 (J3Q17_05390) | rpsR | 1050272..1050532 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| J3Q17_RS05395 (J3Q17_05395) | lon | 1050593..1052968 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| J3Q17_RS05400 (J3Q17_05400) | - | 1052985..1053632 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| J3Q17_RS05405 (J3Q17_05405) | fliW | 1053793..1054182 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| J3Q17_RS05410 (J3Q17_05410) | proC | 1054182..1054913 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| J3Q17_RS05415 (J3Q17_05415) | ctsT | 1054910..1055212 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| J3Q17_RS05420 (J3Q17_05420) | - | 1055209..1055871 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| J3Q17_RS05425 (J3Q17_05425) | - | 1055868..1056320 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| J3Q17_RS05430 (J3Q17_05430) | hemD | 1056317..1056946 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| J3Q17_RS05435 (J3Q17_05435) | thiE | 1056924..1057556 (-) | 633 | WP_207498251.1 | thiamine phosphate synthase | - |
| J3Q17_RS05440 (J3Q17_05440) | thiD | 1057546..1058358 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| J3Q17_RS05445 (J3Q17_05445) | - | 1058355..1059041 (-) | 687 | WP_052802622.1 | endonuclease III domain-containing protein | - |
| J3Q17_RS05450 (J3Q17_05450) | - | 1059038..1059799 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=546396 J3Q17_RS05415 WP_002855822.1 1054910..1055212(+) (ctsT) [Campylobacter jejuni strain R12]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=546396 J3Q17_RS05415 WP_002855822.1 1054910..1055212(+) (ctsT) [Campylobacter jejuni strain R12]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |