Detailed information NTG0054590

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPAKL86_RS03615
• Genome accession: NC_019563
• Coordinates: 723855..724655 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840086.1
• Uniprot ID: -
• Organism: Helicobacter pylori Aklavik86
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 718855..729655

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPAKL86_RS03580 (HPAKL86_03500)	pseH	719355..719897 (+)	543	WP_015087086.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPAKL86_RS03585 (HPAKL86_03505)	-	719830..720768 (-)	939	WP_015087087.1	tetraacyldisaccharide 4'-kinase	-
HPAKL86_RS03590 (HPAKL86_03510)	-	720765..721547 (-)	783	WP_015087088.1	NAD+ synthase	-
HPAKL86_RS03600 (HPAKL86_03515)	ilvC	721796..722788 (+)	993	WP_015087089.1	ketol-acid reductoisomerase	-
HPAKL86_RS03605 (HPAKL86_03520)	minD	722807..723613 (+)	807	WP_015087090.1	septum site-determining protein MinD	-
HPAKL86_RS03610 (HPAKL86_03525)	minE	723610..723843 (+)	234	WP_000051428.1	cell division topological specificity factor MinE	-
HPAKL86_RS03615 (HPAKL86_03530)	dprA	723855..724655 (+)	801	WP_000840086.1	DNA-processing protein DprA	Machinery gene
HPAKL86_RS03620 (HPAKL86_03535)	dprB	724652..725068 (+)	417	WP_015087091.1	Holliday junction resolvase RuvX	Machinery gene
HPAKL86_RS03625 (HPAKL86_03540)	-	725092..725409 (+)	318	WP_015087092.1	tetratricopeptide repeat protein	-
HPAKL86_RS03630 (HPAKL86_03545)	-	725604..725942 (+)	339	WP_015087093.1	hypothetical protein	-
HPAKL86_RS03635 (HPAKL86_03550)	-	725926..726474 (+)	549	WP_015087094.1	hypothetical protein	-
HPAKL86_RS03640 (HPAKL86_03555)	-	726639..727520 (-)	882	WP_015087095.1	RluA family pseudouridine synthase	-
HPAKL86_RS03645 (HPAKL86_03560)	recJ	727520..729070 (-)	1551	WP_015087096.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29782.70 Da
• Isoelectric Point: 8.5925

>NTDB_id=54590 HPAKL86_RS03615 WP_000840086.1 723855..724655(+) (dprA) [Helicobacter pylori Aklavik86]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=54590 HPAKL86_RS03615 WP_000840086.1 723855..724655(+) (dprA) [Helicobacter pylori Aklavik86]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAGGCCTTTGACATCCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACAAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGTCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTGGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414