Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HPAKL86_RS03620 | Genome accession | NC_019563 |
| Coordinates | 724652..725068 (+) | Length | 138 a.a. |
| NCBI ID | WP_015087091.1 | Uniprot ID | K7YN05 |
| Organism | Helicobacter pylori Aklavik86 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 719652..730068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPAKL86_RS03585 (HPAKL86_03505) | - | 719830..720768 (-) | 939 | WP_015087087.1 | tetraacyldisaccharide 4'-kinase | - |
| HPAKL86_RS03590 (HPAKL86_03510) | - | 720765..721547 (-) | 783 | WP_015087088.1 | NAD+ synthase | - |
| HPAKL86_RS03600 (HPAKL86_03515) | ilvC | 721796..722788 (+) | 993 | WP_015087089.1 | ketol-acid reductoisomerase | - |
| HPAKL86_RS03605 (HPAKL86_03520) | minD | 722807..723613 (+) | 807 | WP_015087090.1 | septum site-determining protein MinD | - |
| HPAKL86_RS03610 (HPAKL86_03525) | minE | 723610..723843 (+) | 234 | WP_000051428.1 | cell division topological specificity factor MinE | - |
| HPAKL86_RS03615 (HPAKL86_03530) | dprA | 723855..724655 (+) | 801 | WP_000840086.1 | DNA-processing protein DprA | Machinery gene |
| HPAKL86_RS03620 (HPAKL86_03535) | dprB | 724652..725068 (+) | 417 | WP_015087091.1 | Holliday junction resolvase RuvX | Machinery gene |
| HPAKL86_RS03625 (HPAKL86_03540) | - | 725092..725409 (+) | 318 | WP_015087092.1 | tetratricopeptide repeat protein | - |
| HPAKL86_RS03630 (HPAKL86_03545) | - | 725604..725942 (+) | 339 | WP_015087093.1 | hypothetical protein | - |
| HPAKL86_RS03635 (HPAKL86_03550) | - | 725926..726474 (+) | 549 | WP_015087094.1 | hypothetical protein | - |
| HPAKL86_RS03640 (HPAKL86_03555) | - | 726639..727520 (-) | 882 | WP_015087095.1 | RluA family pseudouridine synthase | - |
| HPAKL86_RS03645 (HPAKL86_03560) | recJ | 727520..729070 (-) | 1551 | WP_015087096.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 138 a.a. Molecular weight: 15775.39 Da Isoelectric Point: 9.7337
>NTDB_id=54591 HPAKL86_RS03620 WP_015087091.1 724652..725068(+) (dprB) [Helicobacter pylori Aklavik86]
MILACDVGLKRIGIAALLNGVILPLEAILRQNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKKRYNKV
MILACDVGLKRIGIAALLNGVILPLEAILRQNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKKRYNKV
Nucleotide
Download Length: 417 bp
>NTDB_id=54591 HPAKL86_RS03620 WP_015087091.1 724652..725068(+) (dprB) [Helicobacter pylori Aklavik86]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCAAAATAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGTAAGCCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAACATTTCATCAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGTAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTGAAAAAGC
GCTATAATAAAGTCTAA
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCAAAATAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGTAAGCCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAACATTTCATCAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGTAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTGAAAAAGC
GCTATAATAAAGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
96.97 |
95.652 |
0.928 |