Detailed information NTG0054566

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPAKL117_RS01660
• Genome accession: NC_019560
• Coordinates: 334921..335721 (+)
• Length: 266 a.a.
• NCBI ID: WP_015085528.1
• Uniprot ID: -
• Organism: Helicobacter pylori Aklavik117
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 329921..340721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPAKL117_RS01625 (HPAKL117_01620)	pseH	330422..330964 (+)	543	WP_015085524.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPAKL117_RS01630 (HPAKL117_01625)	-	330897..331835 (-)	939	WP_015085525.1	tetraacyldisaccharide 4'-kinase	-
HPAKL117_RS01635 (HPAKL117_01630)	-	331832..332614 (-)	783	WP_015085526.1	NAD+ synthase	-
HPAKL117_RS01645 (HPAKL117_01635)	ilvC	332862..333854 (+)	993	WP_015085527.1	ketol-acid reductoisomerase	-
HPAKL117_RS01650 (HPAKL117_01640)	minD	333873..334679 (+)	807	WP_001019043.1	septum site-determining protein MinD	-
HPAKL117_RS01655 (HPAKL117_01645)	minE	334676..334909 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HPAKL117_RS01660 (HPAKL117_01650)	dprA	334921..335721 (+)	801	WP_015085528.1	DNA-processing protein DprA	Machinery gene
HPAKL117_RS01665 (HPAKL117_01655)	dprB	335718..336122 (+)	405	WP_015085529.1	Holliday junction resolvase RuvX	Machinery gene
HPAKL117_RS01670 (HPAKL117_01665)	-	336249..336914 (+)	666	WP_015085531.1	tetratricopeptide repeat protein	-
HPAKL117_RS01675 (HPAKL117_01670)	-	337109..337447 (+)	339	WP_000699911.1	hypothetical protein	-
HPAKL117_RS01680 (HPAKL117_01675)	-	337431..337991 (+)	561	WP_015085532.1	hypothetical protein	-
HPAKL117_RS01685 (HPAKL117_01680)	-	338156..339037 (-)	882	WP_015085533.1	RluA family pseudouridine synthase	-
HPAKL117_RS01690 (HPAKL117_01685)	recJ	339037..340587 (-)	1551	WP_015085534.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29837.78 Da
• Isoelectric Point: 8.9052

>NTDB_id=54566 HPAKL117_RS01660 WP_015085528.1 334921..335721(+) (dprA) [Helicobacter pylori Aklavik117]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHQVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=54566 HPAKL117_RS01660 WP_015085528.1 334921..335721(+) (dprA) [Helicobacter pylori Aklavik117]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCTACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATCAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATTGCTTTAAGCGATGCGGTGATTATCCCTCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCAAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41