Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J0W32_RS04165 Genome accession   NZ_CP071317
Coordinates   872074..872457 (-) Length   127 a.a.
NCBI ID   WP_005179541.1    Uniprot ID   A0A6C0Y077
Organism   Acinetobacter indicus strain GXNN15X4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Genomic island 871149..880977 872074..872457 within 0


Gene organization within MGE regions


Location: 871149..880977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J0W32_RS04155 (J0W32_04155) - 871149..871685 (-) 537 WP_005179538.1 chemotaxis protein CheW -
  J0W32_RS04160 (J0W32_04160) - 871689..872057 (-) 369 WP_005179539.1 PleD family two-component system response regulator -
  J0W32_RS04165 (J0W32_04165) pilG 872074..872457 (-) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  J0W32_RS04170 (J0W32_04170) - 872829..873380 (+) 552 WP_225876431.1 hypothetical protein -
  J0W32_RS04175 (J0W32_04175) - 873435..874580 (+) 1146 WP_180056423.1 efflux RND transporter periplasmic adaptor subunit -
  J0W32_RS04180 (J0W32_04180) - 874587..877691 (+) 3105 WP_180056422.1 efflux RND transporter permease subunit -
  J0W32_RS04185 (J0W32_04185) - 877789..879504 (+) 1716 WP_104469971.1 proline--tRNA ligase -
  J0W32_RS04190 (J0W32_04190) - 879559..880977 (-) 1419 WP_180056421.1 hypothetical protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14225.27 Da        Isoelectric Point: 4.7066

>NTDB_id=544897 J0W32_RS04165 WP_005179541.1 872074..872457(-) (pilG) [Acinetobacter indicus strain GXNN15X4]
MDDKLQNLKVMVIDDSKTIRRTAETLLQREGYEVVTAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=544897 J0W32_RS04165 WP_005179541.1 872074..872457(-) (pilG) [Acinetobacter indicus strain GXNN15X4]
ATGGACGATAAACTCCAAAATCTAAAAGTCATGGTGATTGATGATTCAAAAACCATTCGTCGTACAGCTGAAACTTTATT
ACAGCGTGAAGGCTATGAAGTGGTCACTGCCGTCGACGGTTTTGAAGCATTGTCTAAAATTGCCGATGCAAATCCGGATA
TCGTTTTTGTTGACATCATGATGCCACGTCTAGATGGCTATCAAACCTGCGCATTAATTAAAAACTCGCAAAACTACCAG
AATATTCCAGTCATCATGCTGTCCAGTAAAGATGGTCTGTTCGATCAGGCCAAAGGCCGCGTGGTGGGTTCAGATGAATA
TTTAACCAAACCTTTTAGTAAAGATGAGCTTTTAAACGCGATTCGTAATCACGTAAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6C0Y077

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37