Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   J0J35_RS07935 Genome accession   NZ_CP071301
Coordinates   1610578..1611825 (-) Length   415 a.a.
NCBI ID   WP_086583290.1    Uniprot ID   -
Organism   Lactococcus sp. LG606     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1605578..1616825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J0J35_RS11810 - 1607154..1607753 (-) 600 Protein_1552 PolC-type DNA polymerase III N-terminal domain-containing protein -
  J0J35_RS07925 (J0J35_07925) - 1607859..1608233 (-) 375 WP_206916546.1 hypothetical protein -
  J0J35_RS07930 (J0J35_07930) - 1608701..1610551 (-) 1851 WP_017369962.1 proline--tRNA ligase -
  J0J35_RS07935 (J0J35_07935) eeP 1610578..1611825 (-) 1248 WP_086583290.1 RIP metalloprotease RseP Regulator
  J0J35_RS07940 (J0J35_07940) - 1612002..1612796 (-) 795 WP_019291563.1 phosphatidate cytidylyltransferase -
  J0J35_RS07945 (J0J35_07945) - 1612793..1613530 (-) 738 WP_019292981.1 isoprenyl transferase -
  J0J35_RS07950 (J0J35_07950) yajC 1613730..1614065 (-) 336 WP_019292982.1 preprotein translocase subunit YajC -
  J0J35_RS07955 (J0J35_07955) - 1614140..1614787 (-) 648 WP_046401302.1 DNA alkylation repair protein -
  J0J35_RS07960 (J0J35_07960) rlmH 1614784..1615263 (-) 480 WP_019291566.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  J0J35_RS07965 (J0J35_07965) htrA 1615567..1616784 (+) 1218 WP_019291567.1 S1C family serine protease Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45089.51 Da        Isoelectric Point: 5.8072

>NTDB_id=544806 J0J35_RS07935 WP_086583290.1 1610578..1611825(-) (eeP) [Lactococcus sp. LG606]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGETKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQSKDKIQAVNGEKTNNWEEVVQ
RIGANDGSEIKLDIERAGATKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANATTLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSVIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=544806 J0J35_RS07935 WP_086583290.1 1610578..1611825(-) (eeP) [Lactococcus sp. LG606]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAGTATGGTCATCTGTTCTTTGC
TAAGCGCGCGGGGATTTTAGTCCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGTA
CGTTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTCCGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGAACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAGCGGGTGACTTTGGAAAA
TAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCACTTTTCATCGAAGGAGAAGTTTTTGGTGAAACAAAAC
GTTATTCAGTTGACCATGATGCAACAATTATCGAAGCGGATGGCACGGAACTTCGTATCGCTCCACGCGACGTACAATAT
CAAAGTGCCAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGTCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTCCAATCTGGCACCCCTGCTT
ATTCGGCAGGTTTACAGTCAAAGGATAAAATCCAAGCAGTCAATGGTGAAAAAACCAATAACTGGGAAGAAGTTGTCCAA
AGGATCGGTGCAAATGATGGCAGTGAAATCAAGCTGGATATCGAACGTGCAGGTGCGACGAAGACACTGGAGCTCAAGCC
AGAAAAAATTGACGGAAGATACCGCATTGGTATCACTCAAACAATCAAAACTGGCTTTTTAGATAAGCTAACGGGTGGCT
TTACTCAGGCTGCTAACGCAACAACGTTGATATTTAAAGCTTTAGGTAACCTCATTGCACAGCCAAGTCTTGATAAACTT
GGTGGACCCGTTGCCATTTATGATTTAAGTGGGCAAGCAGCCCGAGAAGGTCTATTATCTGTTATCGCTTTACTTGCCAT
GCTCTCAATTAATCTGGGAATCGTAAATTTAATCCCAATCCCCGTCCTTGACGGAGGGAAAATTGTCCTCAATATTGTTG
AGGCCCTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATCTTAACACTTGTTGGTCTTGTCTTTATGGTGGTCTTG
ATGATTGCTGTGACTTGGAATGATATCCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.086

100

0.566

  eeP Streptococcus thermophilus LMD-9

55.847

100

0.564