Detailed information NTG0054347

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SCAZ3_RS05995
• Genome accession: NZ_AIDX01000001
• Coordinates: 1246180..1247466 (-)
• Length: 428 a.a.
• NCBI ID: WP_003046353.1
• Uniprot ID: -
• Organism: Streptococcus canis FSL Z3-227
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1241180..1252466

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCAZ3_RS05970 (SCAZ3_01375)	galT	1241981..1243459 (+)	1479	WP_003046343.1	UDP-glucose--hexose-1-phosphate uridylyltransferase	-
SCAZ3_RS05975 (SCAZ3_01380)	galE	1243495..1244490 (+)	996	WP_003046346.1	UDP-glucose 4-epimerase GalE	-
SCAZ3_RS05980 (SCAZ3_01385)	-	1244548..1244706 (+)	159	Protein_1151	integrase	-
SCAZ3_RS05985 (SCAZ3_01390)	-	1244943..1245602 (+)	660	WP_003046349.1	hypothetical protein	-
SCAZ3_RS05995 (SCAZ3_01395)	rarA	1246180..1247466 (-)	1287	WP_003046353.1	replication-associated recombination protein A	Machinery gene
SCAZ3_RS06000 (SCAZ3_01400)	-	1247499..1248065 (-)	567	WP_003046357.1	aminodeoxychorismate/anthranilate synthase component II	-
SCAZ3_RS06005 (SCAZ3_01405)	pabB	1248099..1249856 (-)	1758	WP_003046359.1	aminodeoxychorismate synthase component I	-
SCAZ3_RS06010 (SCAZ3_01410)	-	1250057..1252036 (-)	1980	WP_003046362.1	amidase family protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 47189.75 Da
• Isoelectric Point: 7.0887

>NTDB_id=54347 SCAZ3_RS05995 WP_003046353.1 1246180..1247466(-) (rarA) [Streptococcus canis FSL Z3-227]
MPDHLALRMRPKTISEVIGQEHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNENIKRALQ
TAITDKDRGFAFEVALDEDALDFIATATNGDLRSAYHSLDLAVMSTKPDNDGKRHITLDTVENSLQRSYITMDKDGDGHY
DVLSALQKAIRGSDVNASLHYAARLVEAGDLPSLARRLIVIAYEDVGLANPNAQVHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALSDLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGKQYFSP
NETGKYERALGANKERIDKLSSKSFEGR

Nucleotide

• Length: 1287 bp

>NTDB_id=54347 SCAZ3_RS05995 WP_003046353.1 1246180..1247466(-) (rarA) [Streptococcus canis FSL Z3-227]
ATGCCCGATCATTTAGCGCTCCGCATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAGAACATCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCCAATAGGCTATCGTCCATGATTCTCTATGGCCCTCCAGGAATTGGTAAAACTT
CCATTGCTAGCGCTATTGCAGGTACTACCAAATATGCCTTTCGGACCTTTAATGCCACCGTTGACAGCAAAAAACGTCTC
CAAGAAATTGCTGAAGAAGCTAAATTTTCAGGAGGCTTGGTGTTGCTACTAGACGAGATTCATCGCCTTGACAAAACCAA
GCAAGACTTCTTGCTTCCCTTACTGGAAAATGGGACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCCGAGTTCAGATTTTTGAACTGGAACCTCTCTCCAACGAGAATATCAAGCGTGCCCTTCAA
ACTGCCATTACCGATAAAGACAGAGGCTTCGCCTTTGAGGTAGCCCTAGACGAAGATGCTCTTGATTTTATCGCAACCGC
CACTAATGGGGATTTACGCTCAGCTTATCACTCTCTGGATTTGGCAGTTATGTCCACAAAGCCAGATAACGACGGGAAAC
GACACATCACCTTAGACACCGTTGAAAATTCCTTGCAGCGCAGCTATATTACTATGGATAAAGATGGTGACGGGCATTAT
GATGTTTTATCTGCCCTCCAAAAAGCGATTCGCGGCTCCGATGTCAATGCCAGCCTTCACTATGCCGCGCGATTAGTGGA
AGCAGGGGATTTACCAAGCCTTGCCAGACGATTGATAGTGATTGCTTATGAAGACGTTGGACTGGCTAATCCCAATGCCC
AAGTCCATACCGTCACCGCACTCGATGCCGCCCAGAAAATTGGTTTCCCCGAAGCACGCATTCTAATTGCCAACGTGGTC
ATTGATTTGGCCTTGTCTCCAAAATCCAACTCAGCTTATCTAGCAATGGATGCTGCCCTTAGCGATCTGAGAACATCAGG
AAACCTTCCCATTCCAAGACATTTGAGAGATGGGCACTATGCTGGCAGCAAAGACCTTGGCAATGCCAAAGATTACCTTT
ACCCACATGCCTATCCAGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTTGGCAAACAGTATTTTTCCCCC
AACGAAACAGGAAAATATGAACGTGCCCTCGGTGCCAATAAAGAGCGTATTGACAAGCTTTCTAGCAAATCATTCGAAGG
CAGATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.524	98.131	0.584