Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   JS609_RS16215 Genome accession   NZ_CP071043
Coordinates   3121257..3123554 (-) Length   765 a.a.
NCBI ID   WP_153912412.1    Uniprot ID   -
Organism   Bacillus subtilis isolate ELA2001105     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3116257..3128554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JS609_RS16175 (JS609_03186) mrpB 3116724..3117155 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  JS609_RS16180 (JS609_03187) mrpC 3117155..3117496 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  JS609_RS16185 (JS609_03188) mrpD 3117489..3118970 (+) 1482 WP_213414935.1 Na+/H+ antiporter subunit D -
  JS609_RS16190 (JS609_03189) mrpE 3118976..3119452 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  JS609_RS16195 (JS609_03190) mrpF 3119452..3119736 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  JS609_RS16200 (JS609_03191) mnhG 3119720..3120094 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  JS609_RS16205 (JS609_03192) yuxO 3120133..3120513 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  JS609_RS16210 (JS609_03193) comA 3120532..3121176 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  JS609_RS16215 (JS609_03194) comP 3121257..3123554 (-) 2298 WP_153912412.1 histidine kinase Regulator
  JS609_RS16220 (JS609_03195) comX 3123562..3123723 (-) 162 WP_049140565.1 competence pheromone ComX -
  JS609_RS16225 (JS609_03196) - 3123738..3124598 (-) 861 WP_040081966.1 polyprenyl synthetase family protein -
  JS609_RS16230 (JS609_03197) degQ 3124783..3124923 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  JS609_RS16235 - 3125145..3125270 (+) 126 WP_121549029.1 hypothetical protein -
  JS609_RS16240 (JS609_03198) - 3125384..3125752 (+) 369 WP_213414936.1 hypothetical protein -
  JS609_RS16245 (JS609_03199) pdeH 3125728..3126957 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88336.63 Da        Isoelectric Point: 8.3224

>NTDB_id=542538 JS609_RS16215 WP_153912412.1 3121257..3123554(-) (comP) [Bacillus subtilis isolate ELA2001105]
MKSRNNKISVVLVVLSLIYVIYLTYISNNNLLVGATVSKGKNGDIVITNVDEFSMASYSGIEKGDIVKSINNKKINTNEI
KMNKLKNVSSMIVERNGHNLELKMTLFNDKNFTTYLIPLIFYIVCLFCCFFILKINESKNLLSAVVLIIFLLSASIAFIS
AGGSAKGDMLSRLIMVVTLISVPLNYLLFLYQYFKELGTKLFNKKVFILYLIPVINVVCEIFRSHLFFRDYVPKLNLLAF
FFLFIIVGVYFSIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMLLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGNIKLYDDENVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=542538 JS609_RS16215 WP_153912412.1 3121257..3123554(-) (comP) [Bacillus subtilis isolate ELA2001105]
ATGAAGTCTAGAAATAACAAAATTTCTGTAGTGTTAGTTGTATTAAGTTTGATTTATGTTATTTATTTGACTTATATTAG
TAATAATAATTTATTAGTAGGGGCAACTGTCTCTAAAGGAAAAAATGGCGATATTGTAATTACCAATGTAGATGAATTTT
CAATGGCTTCATACAGCGGTATAGAAAAAGGAGATATCGTAAAGAGTATTAATAATAAAAAGATAAACACAAACGAAATA
AAAATGAACAAACTAAAAAATGTAAGTTCGATGATTGTGGAAAGAAATGGACATAATCTTGAGTTGAAAATGACCTTATT
TAATGATAAAAATTTCACTACTTACTTAATACCGTTAATATTTTATATTGTTTGTTTATTTTGTTGCTTTTTTATATTAA
AAATAAATGAATCAAAGAACCTTCTCTCAGCTGTAGTTTTAATTATCTTTCTGTTGTCTGCCTCTATTGCATTTATAAGT
GCTGGAGGGTCTGCTAAGGGAGATATGCTGAGCAGGCTTATAATGGTGGTAACATTAATATCTGTTCCGCTAAACTATCT
TCTCTTTCTTTATCAATATTTCAAAGAATTAGGAACCAAATTATTTAATAAGAAAGTTTTTATTTTATATTTGATTCCGG
TCATAAATGTAGTTTGTGAAATTTTTCGTTCACATCTTTTCTTTCGAGATTATGTTCCTAAATTAAATTTACTTGCTTTT
TTCTTTTTATTTATTATAGTAGGGGTTTATTTTAGTATCATACTAATTAAAAATAAAGACACTGAACAAGCACATATTAT
TAAGGTTCTCACTATCATTAATATCTTTTCTTTTTCGCCTTTTCTGTGTTTATATTTGATACCTTACGTGTTTTTAAATG
CACATTATGTTTCTTCTTTTTTAGCGGCTTCATTTATGCTGCTGATACCATTCTCATTGGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTACTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCAGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCCTATCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAATATTAAACTATATGATGATGAGAACG
TAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAAATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAG
GAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTAATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGGTGATTTTAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTGCAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTGGTG
AAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGGAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTTGAT
CAAGAAAAAAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.067

100

0.596