Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JS609_RS02180 Genome accession   NZ_CP071043
Coordinates   427188..428138 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis isolate ELA2001105     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 422188..433138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JS609_RS02155 (JS609_00422) rapC 423647..424795 (+) 1149 WP_024571686.1 response regulator aspartate phosphatase RapC Regulator
  JS609_RS02160 (JS609_00423) phrC 424779..424901 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  JS609_RS02165 (JS609_00424) yczM 425001..425090 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  JS609_RS02170 (JS609_00425) yczN 425172..425285 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  JS609_RS02175 (JS609_00426) thrD 425439..426803 (-) 1365 WP_033883679.1 aspartate kinase -
  JS609_RS02180 (JS609_00427) ceuB 427188..428138 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  JS609_RS02185 (JS609_00428) yclO 428131..429078 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  JS609_RS02190 (JS609_00429) yclP 429072..429830 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  JS609_RS02195 (JS609_00430) yclQ 429852..430805 (+) 954 WP_038428358.1 petrobactin ABC transporter substrate-binding protein YclQ -
  JS609_RS02200 (JS609_00431) cdaE 430852..432270 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=542486 JS609_RS02180 WP_014475804.1 427188..428138(+) (ceuB) [Bacillus subtilis isolate ELA2001105]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=542486 JS609_RS02180 WP_014475804.1 427188..428138(+) (ceuB) [Bacillus subtilis isolate ELA2001105]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525