Detailed information NTG0542484

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: JS609_RS02155
• Genome accession: NZ_CP071043
• Coordinates: 423647..424795 (+)
• Length: 382 a.a.
• NCBI ID: WP_024571686.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate ELA2001105
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 418647..429795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JS609_RS02135 (JS609_00418)	yclH	419034..419714 (-)	681	WP_213414882.1	ABC transporter ATP-binding protein	-
JS609_RS02140 (JS609_00419)	yclI	419730..421184 (-)	1455	WP_128992405.1	ABC transporter permease	-
JS609_RS02145 (JS609_00420)	yclJ	421393..422076 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
JS609_RS02150 (JS609_00421)	yclK	422063..423484 (+)	1422	WP_213414881.1	sensor histidine kinase	-
JS609_RS02155 (JS609_00422)	rapC	423647..424795 (+)	1149	WP_024571686.1	response regulator aspartate phosphatase RapC	Regulator
JS609_RS02160 (JS609_00423)	phrC	424779..424901 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
JS609_RS02165 (JS609_00424)	yczM	425001..425090 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
JS609_RS02170 (JS609_00425)	yczN	425172..425285 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
JS609_RS02175 (JS609_00426)	thrD	425439..426803 (-)	1365	WP_033883679.1	aspartate kinase	-
JS609_RS02180 (JS609_00427)	ceuB	427188..428138 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
JS609_RS02185 (JS609_00428)	yclO	428131..429078 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45591.61 Da
• Isoelectric Point: 5.0364

>NTDB_id=542484 JS609_RS02155 WP_024571686.1 423647..424795(+) (rapC) [Bacillus subtilis isolate ELA2001105]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLG
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=542484 JS609_RS02155 WP_024571686.1 423647..424795(+) (rapC) [Bacillus subtilis isolate ELA2001105]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGGC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568